Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 MTDHP1-201ENST00000605323 784 ntBASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 AP006587.1-201ENST00000534129 1502 ntBASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BLOC1S4Q9NUP1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
BLOC1S4Q9NUP1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
BLOC1S4Q9NUP1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
BLOC1S4Q9NUP1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
BLOC1S4Q9NUP1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.89■■□□□ 1.1
BLOC1S4Q9NUP1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 AC116562.4-201ENST00000641316 2276 ntBASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.89■■□□□ 1.09
BLOC1S4Q9NUP1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 AC093484.2-201ENST00000580996 2166 ntBASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
BLOC1S4Q9NUP1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 KRT17P3-201ENST00000420566 1262 ntBASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 YBX1P10-201ENST00000444752 975 ntBASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 Z82202.1-201ENST00000623446 1880 ntBASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms