Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLE3Q9NRF9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLE3Q9NRF9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 AC018553.1-201ENST00000616682 1458 ntBASIC18.24■□□□□ 0.51
POLE3Q9NRF9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLE3Q9NRF9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 AL138781.1-201ENST00000566567 1274 ntBASIC18.23■□□□□ 0.51
POLE3Q9NRF9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.23■□□□□ 0.51
POLE3Q9NRF9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms