Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TLR9Q9NR96 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.91■□□□□ 0.94
TLR9Q9NR96 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TLR9Q9NR96 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TLR9Q9NR96 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TLR9Q9NR96 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.91■□□□□ 0.94
TLR9Q9NR96 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.91■□□□□ 0.94
TLR9Q9NR96 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TLR9Q9NR96 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TLR9Q9NR96 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.91■□□□□ 0.94
TLR9Q9NR96 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.91■□□□□ 0.94
TLR9Q9NR96 RCC2P6-201ENST00000526625 1557 ntBASIC20.91■□□□□ 0.94
TLR9Q9NR96 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.91■□□□□ 0.94
TLR9Q9NR96 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.91■□□□□ 0.94
TLR9Q9NR96 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TLR9Q9NR96 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TLR9Q9NR96 AC011298.2-201ENST00000617989 482 ntBASIC20.91■□□□□ 0.94
TLR9Q9NR96 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TLR9Q9NR96 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR9Q9NR96 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TLR9Q9NR96 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR9Q9NR96 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TLR9Q9NR96 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TLR9Q9NR96 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR9Q9NR96 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR9Q9NR96 AC117947.1-201ENST00000427448 529 ntBASIC20.9■□□□□ 0.94
TLR9Q9NR96 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.9■□□□□ 0.94
TLR9Q9NR96 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.9■□□□□ 0.94
TLR9Q9NR96 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR9Q9NR96 AC091076.1-201ENST00000610741 619 ntBASIC20.9■□□□□ 0.94
TLR9Q9NR96 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TLR9Q9NR96 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR9Q9NR96 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.9■□□□□ 0.94
TLR9Q9NR96 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TLR9Q9NR96 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TLR9Q9NR96 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR9Q9NR96 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TLR9Q9NR96 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TLR9Q9NR96 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
TLR9Q9NR96 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TLR9Q9NR96 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.89■□□□□ 0.93
TLR9Q9NR96 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TLR9Q9NR96 UPK3BP1-201ENST00000428678 509 ntBASIC20.89■□□□□ 0.93
TLR9Q9NR96 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.89■□□□□ 0.93
TLR9Q9NR96 TPM4P1-201ENST00000436100 807 ntBASIC20.89■□□□□ 0.93
TLR9Q9NR96 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.89■□□□□ 0.93
TLR9Q9NR96 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TLR9Q9NR96 AC116562.4-202ENST00000641738 218 ntBASIC20.89■□□□□ 0.93
TLR9Q9NR96 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TLR9Q9NR96 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TLR9Q9NR96 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TLR9Q9NR96 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.89■□□□□ 0.93
TLR9Q9NR96 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TLR9Q9NR96 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TLR9Q9NR96 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TLR9Q9NR96 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TLR9Q9NR96 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TLR9Q9NR96 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TLR9Q9NR96 FEM1AP4-201ENST00000443167 1987 ntBASIC20.88■□□□□ 0.93
TLR9Q9NR96 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.88■□□□□ 0.93
TLR9Q9NR96 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TLR9Q9NR96 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TLR9Q9NR96 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TLR9Q9NR96 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TLR9Q9NR96 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.88■□□□□ 0.93
TLR9Q9NR96 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TLR9Q9NR96 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TLR9Q9NR96 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TLR9Q9NR96 AC004951.3-201ENST00000418645 1148 ntBASIC20.88■□□□□ 0.93
TLR9Q9NR96 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TLR9Q9NR96 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.88■□□□□ 0.93
TLR9Q9NR96 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.88■□□□□ 0.93
TLR9Q9NR96 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.88■□□□□ 0.93
TLR9Q9NR96 AL358472.4-201ENST00000633140 710 ntBASIC20.88■□□□□ 0.93
TLR9Q9NR96 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TLR9Q9NR96 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TLR9Q9NR96 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TLR9Q9NR96 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TLR9Q9NR96 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.87■□□□□ 0.93
TLR9Q9NR96 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TLR9Q9NR96 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TLR9Q9NR96 MFAP1P1-201ENST00000442257 1255 ntBASIC20.87■□□□□ 0.93
TLR9Q9NR96 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TLR9Q9NR96 CCR12P-201ENST00000446203 998 ntBASIC20.87■□□□□ 0.93
TLR9Q9NR96 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
TLR9Q9NR96 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.87■□□□□ 0.93
TLR9Q9NR96 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TLR9Q9NR96 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TLR9Q9NR96 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TLR9Q9NR96 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TLR9Q9NR96 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TLR9Q9NR96 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TLR9Q9NR96 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TLR9Q9NR96 AC096733.2-201ENST00000609937 1394 ntBASIC20.86■□□□□ 0.93
TLR9Q9NR96 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR9Q9NR96 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR9Q9NR96 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.86■□□□□ 0.93
TLR9Q9NR96 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR9Q9NR96 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR9Q9NR96 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms