Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
ZFYVE28Q9HCC9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 VENTXP5-201ENST00000523979 775 ntBASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 AL136038.3-201ENST00000561909 1096 ntBASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZFYVE28Q9HCC9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
ZFYVE28Q9HCC9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 DPP3P2-201ENST00000416030 1696 ntBASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 KRT18P38-201ENST00000449496 1282 ntBASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 Z98882.1-201ENST00000622160 2253 ntBASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.53■■□□□ 1.2
ZFYVE28Q9HCC9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 AC005229.4-201ENST00000610085 2198 ntBASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 CA15P1-201ENST00000481698 905 ntBASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 Z85996.1-201ENST00000494644 937 ntBASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.52■■□□□ 1.2
ZFYVE28Q9HCC9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
ZFYVE28Q9HCC9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
ZFYVE28Q9HCC9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms