Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PIF1Q9H611 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 MIR935-201ENST00000401179 91 ntBASIC18.75■□□□□ 0.59
PIF1Q9H611 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PIF1Q9H611 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PIF1Q9H611 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PIF1Q9H611 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PIF1Q9H611 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PIF1Q9H611 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PIF1Q9H611 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PIF1Q9H611 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PIF1Q9H611 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.74■□□□□ 0.59
PIF1Q9H611 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PIF1Q9H611 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PIF1Q9H611 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 AC009237.14-201ENST00000609975 1594 ntBASIC18.74■□□□□ 0.59
PIF1Q9H611 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 CYP21A1P-202ENST00000354927 1481 ntBASIC18.74■□□□□ 0.59
PIF1Q9H611 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.74■□□□□ 0.59
PIF1Q9H611 KRT18P61-201ENST00000585825 1298 ntBASIC18.74■□□□□ 0.59
PIF1Q9H611 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.74■□□□□ 0.59
PIF1Q9H611 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PIF1Q9H611 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PIF1Q9H611 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PIF1Q9H611 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.73■□□□□ 0.59
PIF1Q9H611 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
PIF1Q9H611 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
PIF1Q9H611 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.73■□□□□ 0.59
PIF1Q9H611 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 KRT18P5-201ENST00000436075 1291 ntBASIC18.73■□□□□ 0.59
PIF1Q9H611 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PIF1Q9H611 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PIF1Q9H611 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PIF1Q9H611 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 PTBP1P-201ENST00000554374 1601 ntBASIC18.73■□□□□ 0.59
PIF1Q9H611 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.73■□□□□ 0.59
PIF1Q9H611 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PIF1Q9H611 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PIF1Q9H611 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.73■□□□□ 0.59
PIF1Q9H611 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PIF1Q9H611 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.72■□□□□ 0.59
PIF1Q9H611 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.72■□□□□ 0.59
PIF1Q9H611 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
PIF1Q9H611 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PIF1Q9H611 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.72■□□□□ 0.59
PIF1Q9H611 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PIF1Q9H611 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.72■□□□□ 0.59
PIF1Q9H611 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.72■□□□□ 0.59
PIF1Q9H611 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.72■□□□□ 0.59
PIF1Q9H611 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.72■□□□□ 0.59
PIF1Q9H611 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.72■□□□□ 0.59
PIF1Q9H611 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.72■□□□□ 0.59
PIF1Q9H611 MYCNOS-205ENST00000641950 531 ntBASIC18.72■□□□□ 0.59
PIF1Q9H611 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PIF1Q9H611 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
PIF1Q9H611 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PIF1Q9H611 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms