Protein–RNA interactions for Protein: Q9H322

VCX2, Variable charge X-linked protein 2, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX2Q9H322 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VCX2Q9H322 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VCX2Q9H322 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.95□□□□□ -0.18
VCX2Q9H322 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
VCX2Q9H322 BX119927.1-201ENST00000636596 1552 ntBASIC13.95□□□□□ -0.18
VCX2Q9H322 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.95□□□□□ -0.18
VCX2Q9H322 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
VCX2Q9H322 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VCX2Q9H322 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VCX2Q9H322 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VCX2Q9H322 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VCX2Q9H322 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
VCX2Q9H322 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.95□□□□□ -0.18
VCX2Q9H322 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VCX2Q9H322 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VCX2Q9H322 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VCX2Q9H322 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VCX2Q9H322 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.94□□□□□ -0.18
VCX2Q9H322 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.94□□□□□ -0.18
VCX2Q9H322 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VCX2Q9H322 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
VCX2Q9H322 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.94□□□□□ -0.18
VCX2Q9H322 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.94□□□□□ -0.18
VCX2Q9H322 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.94□□□□□ -0.18
VCX2Q9H322 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VCX2Q9H322 MIR4466-201ENST00000606121 54 ntBASIC13.94□□□□□ -0.18
VCX2Q9H322 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VCX2Q9H322 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VCX2Q9H322 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VCX2Q9H322 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VCX2Q9H322 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.94□□□□□ -0.18
VCX2Q9H322 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.94□□□□□ -0.18
VCX2Q9H322 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.94□□□□□ -0.18
VCX2Q9H322 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VCX2Q9H322 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VCX2Q9H322 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
VCX2Q9H322 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.94□□□□□ -0.18
VCX2Q9H322 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
VCX2Q9H322 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.94□□□□□ -0.18
VCX2Q9H322 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.93□□□□□ -0.18
VCX2Q9H322 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VCX2Q9H322 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VCX2Q9H322 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.93□□□□□ -0.18
VCX2Q9H322 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 MIR4767-201ENST00000582827 78 ntBASIC13.93□□□□□ -0.18
VCX2Q9H322 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.93□□□□□ -0.18
VCX2Q9H322 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.93□□□□□ -0.18
VCX2Q9H322 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.93□□□□□ -0.18
VCX2Q9H322 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VCX2Q9H322 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VCX2Q9H322 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VCX2Q9H322 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 AC093503.3-201ENST00000624917 2352 ntBASIC13.93□□□□□ -0.18
VCX2Q9H322 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VCX2Q9H322 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.92□□□□□ -0.18
VCX2Q9H322 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VCX2Q9H322 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VCX2Q9H322 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.92□□□□□ -0.18
VCX2Q9H322 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VCX2Q9H322 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VCX2Q9H322 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VCX2Q9H322 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.92□□□□□ -0.18
VCX2Q9H322 KRT16P2-201ENST00000414673 1423 ntBASIC13.92□□□□□ -0.18
VCX2Q9H322 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VCX2Q9H322 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VCX2Q9H322 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VCX2Q9H322 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VCX2Q9H322 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.92□□□□□ -0.18
VCX2Q9H322 GUSBP5-201ENST00000418136 578 ntBASIC13.92□□□□□ -0.18
VCX2Q9H322 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.92□□□□□ -0.18
VCX2Q9H322 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VCX2Q9H322 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC13.92□□□□□ -0.18
VCX2Q9H322 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC13.92□□□□□ -0.18
VCX2Q9H322 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.92□□□□□ -0.18
VCX2Q9H322 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.92□□□□□ -0.18
VCX2Q9H322 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC13.92□□□□□ -0.18
VCX2Q9H322 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.92□□□□□ -0.18
VCX2Q9H322 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VCX2Q9H322 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VCX2Q9H322 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VCX2Q9H322 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VCX2Q9H322 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms