Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 AL031848.2-201ENST00000607670 837 ntBASIC18.72■□□□□ 0.59
VCX3BQ9H321 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 AC009237.3-201ENST00000393279 1427 ntBASIC18.72■□□□□ 0.59
VCX3BQ9H321 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VCX3BQ9H321 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX3BQ9H321 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCX3BQ9H321 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VCX3BQ9H321 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCX3BQ9H321 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.71■□□□□ 0.59
VCX3BQ9H321 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.71■□□□□ 0.59
VCX3BQ9H321 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCX3BQ9H321 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VCX3BQ9H321 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.71■□□□□ 0.59
VCX3BQ9H321 AC099791.2-201ENST00000605725 427 ntBASIC18.71■□□□□ 0.59
VCX3BQ9H321 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCX3BQ9H321 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCX3BQ9H321 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VCX3BQ9H321 AC009237.14-201ENST00000609975 1594 ntBASIC18.71■□□□□ 0.59
VCX3BQ9H321 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.71■□□□□ 0.59
VCX3BQ9H321 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCX3BQ9H321 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCX3BQ9H321 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.71■□□□□ 0.59
VCX3BQ9H321 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCX3BQ9H321 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCX3BQ9H321 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.7■□□□□ 0.58
VCX3BQ9H321 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCX3BQ9H321 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VCX3BQ9H321 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCX3BQ9H321 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.7■□□□□ 0.58
VCX3BQ9H321 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VCX3BQ9H321 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.7■□□□□ 0.58
VCX3BQ9H321 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.7■□□□□ 0.58
VCX3BQ9H321 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
VCX3BQ9H321 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
VCX3BQ9H321 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VCX3BQ9H321 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.7■□□□□ 0.58
VCX3BQ9H321 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.7■□□□□ 0.58
VCX3BQ9H321 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCX3BQ9H321 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VCX3BQ9H321 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
VCX3BQ9H321 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VCX3BQ9H321 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCX3BQ9H321 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCX3BQ9H321 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VCX3BQ9H321 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCX3BQ9H321 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VCX3BQ9H321 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCX3BQ9H321 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VCX3BQ9H321 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCX3BQ9H321 ATP5G2P3-201ENST00000429083 425 ntBASIC18.69■□□□□ 0.58
VCX3BQ9H321 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.69■□□□□ 0.58
VCX3BQ9H321 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.69■□□□□ 0.58
VCX3BQ9H321 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.69■□□□□ 0.58
VCX3BQ9H321 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCX3BQ9H321 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VCX3BQ9H321 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCX3BQ9H321 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.69■□□□□ 0.58
VCX3BQ9H321 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VCX3BQ9H321 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCX3BQ9H321 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.69■□□□□ 0.58
VCX3BQ9H321 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.69■□□□□ 0.58
VCX3BQ9H321 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
VCX3BQ9H321 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
VCX3BQ9H321 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCX3BQ9H321 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
VCX3BQ9H321 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VCX3BQ9H321 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCX3BQ9H321 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VCX3BQ9H321 AC103834.1-201ENST00000520383 144 ntBASIC18.68■□□□□ 0.58
VCX3BQ9H321 AC010997.5-201ENST00000609182 354 ntBASIC18.68■□□□□ 0.58
VCX3BQ9H321 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.68■□□□□ 0.58
VCX3BQ9H321 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.68■□□□□ 0.58
VCX3BQ9H321 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
VCX3BQ9H321 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms