Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 MCRIP2P1-201ENST00000394346 511 ntBASIC20.47■□□□□ 0.87
DDX47Q9H0S4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 AC007322.4-201ENST00000509611 723 ntBASIC20.47■□□□□ 0.87
DDX47Q9H0S4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX47Q9H0S4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 PHGDH-210ENST00000641115 1638 ntBASIC20.46■□□□□ 0.87
DDX47Q9H0S4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 AC105020.6-201ENST00000621523 1217 ntBASIC20.46■□□□□ 0.87
DDX47Q9H0S4 AC013268.1-206ENST00000638368 961 ntBASIC20.46■□□□□ 0.87
DDX47Q9H0S4 AC112229.1-201ENST00000639295 961 ntBASIC20.46■□□□□ 0.87
DDX47Q9H0S4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX47Q9H0S4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
DDX47Q9H0S4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX47Q9H0S4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX47Q9H0S4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 RARRES2P4-201ENST00000514074 484 ntBASIC20.43■□□□□ 0.86
DDX47Q9H0S4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.43■□□□□ 0.86
DDX47Q9H0S4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms