Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP3Q9BZ76 AL662844.1-201ENST00000546340 181 ntBASIC18.77■□□□□ 0.6
CNTNAP3Q9BZ76 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
CNTNAP3Q9BZ76 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CNTNAP3Q9BZ76 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.77■□□□□ 0.6
CNTNAP3Q9BZ76 AF228730.7-201ENST00000641842 219 ntBASIC18.77■□□□□ 0.6
CNTNAP3Q9BZ76 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.77■□□□□ 0.6
CNTNAP3Q9BZ76 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.77■□□□□ 0.6
CNTNAP3Q9BZ76 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNTNAP3Q9BZ76 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CNTNAP3Q9BZ76 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNTNAP3Q9BZ76 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 AL590627.1-203ENST00000421194 1026 ntBASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.76■□□□□ 0.59
CNTNAP3Q9BZ76 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 AP002469.2-201ENST00000531724 424 ntBASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP3Q9BZ76 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 AL356652.1-201ENST00000615962 565 ntBASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 AC007375.3-201ENST00000600936 2314 ntBASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CNTNAP3Q9BZ76 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 AL732292.2-201ENST00000609649 430 ntBASIC18.73■□□□□ 0.59
CNTNAP3Q9BZ76 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms