Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 TPRG1LP1-201ENST00000598702 760 ntBASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.81□□□□□ -0.04
SSBP4Q9BWG4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP4Q9BWG4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 DPP3P2-201ENST00000416030 1696 ntBASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 AC138907.5-202ENST00000569484 235 ntBASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 AC120498.10-201ENST00000621827 505 ntBASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP4Q9BWG4 AC009113.1-201ENST00000570267 2443 ntBASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 KRT87P-202ENST00000534226 1464 ntBASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 KRT8P36-201ENST00000489121 1440 ntBASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP4Q9BWG4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms