Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
TRIM62Q9BVG3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM62Q9BVG3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM62Q9BVG3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM62Q9BVG3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM62Q9BVG3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 AL158047.1-201ENST00000445918 881 ntBASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM62Q9BVG3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM62Q9BVG3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM62Q9BVG3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.52■□□□□ 0.87
TRIM62Q9BVG3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM62Q9BVG3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 AL135905.2-201ENST00000584934 1404 ntBASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM62Q9BVG3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 AL353807.1-201ENST00000427475 662 ntBASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM62Q9BVG3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 AP006294.2-201ENST00000641667 209 ntBASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.49■□□□□ 0.87
TRIM62Q9BVG3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM62Q9BVG3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms