Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LIMD2Q9BT23 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 LTB4R2-202ENST00000528054 3092 ntBASIC11.69□□□□□ -0.54
LIMD2Q9BT23 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 ANKRD20A6P-201ENST00000618763 204 ntBASIC11.69□□□□□ -0.54
LIMD2Q9BT23 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 KRT8P36-201ENST00000489121 1440 ntBASIC11.69□□□□□ -0.54
LIMD2Q9BT23 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
LIMD2Q9BT23 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 AC073314.1-201ENST00000568729 2216 ntBASIC11.68□□□□□ -0.54
LIMD2Q9BT23 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 HES2-205ENST00000487437 968 ntTSL 3 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC11.68□□□□□ -0.54
LIMD2Q9BT23 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LIMD2Q9BT23 MCRIP2P1-201ENST00000394346 511 ntBASIC11.67□□□□□ -0.54
LIMD2Q9BT23 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms