Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.9■□□□□ 0.78
PHOX2BQ99453 B3GAT3P1-201ENST00000471720 806 ntBASIC19.9■□□□□ 0.78
PHOX2BQ99453 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PHOX2BQ99453 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHOX2BQ99453 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHOX2BQ99453 CKBP1-201ENST00000565489 1086 ntBASIC19.9■□□□□ 0.78
PHOX2BQ99453 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
PHOX2BQ99453 AL356652.1-201ENST00000615962 565 ntBASIC19.9■□□□□ 0.78
PHOX2BQ99453 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.9■□□□□ 0.78
PHOX2BQ99453 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHOX2BQ99453 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.9■□□□□ 0.78
PHOX2BQ99453 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHOX2BQ99453 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHOX2BQ99453 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHOX2BQ99453 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHOX2BQ99453 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PHOX2BQ99453 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHOX2BQ99453 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHOX2BQ99453 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHOX2BQ99453 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.9■□□□□ 0.78
PHOX2BQ99453 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHOX2BQ99453 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHOX2BQ99453 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHOX2BQ99453 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHOX2BQ99453 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHOX2BQ99453 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.89■□□□□ 0.77
PHOX2BQ99453 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHOX2BQ99453 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHOX2BQ99453 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PHOX2BQ99453 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.89■□□□□ 0.77
PHOX2BQ99453 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.89■□□□□ 0.77
PHOX2BQ99453 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.89■□□□□ 0.77
PHOX2BQ99453 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.89■□□□□ 0.77
PHOX2BQ99453 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
PHOX2BQ99453 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.89■□□□□ 0.77
PHOX2BQ99453 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PHOX2BQ99453 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.89■□□□□ 0.77
PHOX2BQ99453 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.89■□□□□ 0.77
PHOX2BQ99453 AC111152.3-201ENST00000569699 673 ntBASIC19.89■□□□□ 0.77
PHOX2BQ99453 AC092119.3-201ENST00000612618 583 ntBASIC19.89■□□□□ 0.77
PHOX2BQ99453 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHOX2BQ99453 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PHOX2BQ99453 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHOX2BQ99453 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PHOX2BQ99453 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.88■□□□□ 0.77
PHOX2BQ99453 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHOX2BQ99453 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHOX2BQ99453 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHOX2BQ99453 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHOX2BQ99453 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHOX2BQ99453 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.88■□□□□ 0.77
PHOX2BQ99453 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHOX2BQ99453 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PHOX2BQ99453 HOMER2P1-201ENST00000455653 964 ntBASIC19.88■□□□□ 0.77
PHOX2BQ99453 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.88■□□□□ 0.77
PHOX2BQ99453 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHOX2BQ99453 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PHOX2BQ99453 LINC02084-201ENST00000606069 1096 ntBASIC19.88■□□□□ 0.77
PHOX2BQ99453 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.88■□□□□ 0.77
PHOX2BQ99453 FBXW4P1-201ENST00000426721 2239 ntBASIC19.88■□□□□ 0.77
PHOX2BQ99453 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.88■□□□□ 0.77
PHOX2BQ99453 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHOX2BQ99453 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHOX2BQ99453 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PHOX2BQ99453 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHOX2BQ99453 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.88■□□□□ 0.77
PHOX2BQ99453 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHOX2BQ99453 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.87■□□□□ 0.77
PHOX2BQ99453 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHOX2BQ99453 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHOX2BQ99453 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHOX2BQ99453 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHOX2BQ99453 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.87■□□□□ 0.77
PHOX2BQ99453 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.87■□□□□ 0.77
PHOX2BQ99453 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.87■□□□□ 0.77
PHOX2BQ99453 DGCR10-201ENST00000609839 495 ntBASIC19.87■□□□□ 0.77
PHOX2BQ99453 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PHOX2BQ99453 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.87■□□□□ 0.77
PHOX2BQ99453 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHOX2BQ99453 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHOX2BQ99453 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.87■□□□□ 0.77
PHOX2BQ99453 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHOX2BQ99453 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHOX2BQ99453 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PHOX2BQ99453 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHOX2BQ99453 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHOX2BQ99453 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHOX2BQ99453 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.86■□□□□ 0.77
PHOX2BQ99453 AL441883.1-201ENST00000566170 1045 ntBASIC19.86■□□□□ 0.77
PHOX2BQ99453 MIR3652-201ENST00000579335 131 ntBASIC19.86■□□□□ 0.77
PHOX2BQ99453 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
PHOX2BQ99453 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.86■□□□□ 0.77
PHOX2BQ99453 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHOX2BQ99453 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.86■□□□□ 0.77
PHOX2BQ99453 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHOX2BQ99453 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.86■□□□□ 0.77
PHOX2BQ99453 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.86■□□□□ 0.77
PHOX2BQ99453 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHOX2BQ99453 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHOX2BQ99453 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms