Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 FAM8A6P-201ENST00000407496 1135 ntBASIC17.36■□□□□ 0.37
PCNX1Q96RV3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCNX1Q96RV3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 RCC2P6-201ENST00000526625 1557 ntBASIC17.35■□□□□ 0.37
PCNX1Q96RV3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCNX1Q96RV3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 AC096733.2-201ENST00000609937 1394 ntBASIC17.34■□□□□ 0.37
PCNX1Q96RV3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.34■□□□□ 0.37
PCNX1Q96RV3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCNX1Q96RV3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCNX1Q96RV3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCNX1Q96RV3 FAM87A-204ENST00000613235 858 ntBASIC17.33■□□□□ 0.37
PCNX1Q96RV3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.33■□□□□ 0.37
PCNX1Q96RV3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCNX1Q96RV3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.33■□□□□ 0.37
PCNX1Q96RV3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCNX1Q96RV3 RNF152P1-201ENST00000397754 604 ntBASIC17.33■□□□□ 0.36
PCNX1Q96RV3 AC004951.3-201ENST00000418645 1148 ntBASIC17.33■□□□□ 0.36
PCNX1Q96RV3 AL359075.1-203ENST00000462729 1002 ntBASIC17.33■□□□□ 0.36
PCNX1Q96RV3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.33■□□□□ 0.36
PCNX1Q96RV3 AP000550.4-202ENST00000639755 178 ntBASIC17.33■□□□□ 0.36
PCNX1Q96RV3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCNX1Q96RV3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
PCNX1Q96RV3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.33■□□□□ 0.36
PCNX1Q96RV3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCNX1Q96RV3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.33■□□□□ 0.36
PCNX1Q96RV3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.33■□□□□ 0.36
PCNX1Q96RV3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCNX1Q96RV3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.33■□□□□ 0.36
PCNX1Q96RV3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCNX1Q96RV3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 KRT126P-201ENST00000549467 1181 ntBASIC17.32■□□□□ 0.36
PCNX1Q96RV3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.32■□□□□ 0.36
PCNX1Q96RV3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms