Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.29■□□□□ 0.04
DUX3Q96PT4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
DUX3Q96PT4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
DUX3Q96PT4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 AC012618.2-201ENST00000428058 849 ntBASIC15.29■□□□□ 0.04
DUX3Q96PT4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.29■□□□□ 0.04
DUX3Q96PT4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.29■□□□□ 0.04
DUX3Q96PT4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
DUX3Q96PT4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
DUX3Q96PT4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.29■□□□□ 0.04
DUX3Q96PT4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.29■□□□□ 0.04
DUX3Q96PT4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUX3Q96PT4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
DUX3Q96PT4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
DUX3Q96PT4 HTR7P1-201ENST00000538670 1336 ntBASIC15.28■□□□□ 0.04
DUX3Q96PT4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
DUX3Q96PT4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.28■□□□□ 0.04
DUX3Q96PT4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DUX3Q96PT4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.28■□□□□ 0.04
DUX3Q96PT4 AC113410.3-201ENST00000623366 203 ntBASIC15.28■□□□□ 0.04
DUX3Q96PT4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.28■□□□□ 0.04
DUX3Q96PT4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.28■□□□□ 0.04
DUX3Q96PT4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.28■□□□□ 0.04
DUX3Q96PT4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.28■□□□□ 0.04
DUX3Q96PT4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUX3Q96PT4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.28■□□□□ 0.04
DUX3Q96PT4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
DUX3Q96PT4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX3Q96PT4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUX3Q96PT4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
DUX3Q96PT4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUX3Q96PT4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX3Q96PT4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.27■□□□□ 0.04
DUX3Q96PT4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX3Q96PT4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX3Q96PT4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
DUX3Q96PT4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUX3Q96PT4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.27■□□□□ 0.04
DUX3Q96PT4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUX3Q96PT4 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.27■□□□□ 0.04
DUX3Q96PT4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.27■□□□□ 0.04
DUX3Q96PT4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.27■□□□□ 0.04
DUX3Q96PT4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUX3Q96PT4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.27■□□□□ 0.04
DUX3Q96PT4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUX3Q96PT4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.27■□□□□ 0.03
DUX3Q96PT4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
DUX3Q96PT4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.27■□□□□ 0.03
DUX3Q96PT4 AL391422.3-201ENST00000603791 2761 ntBASIC15.27■□□□□ 0.03
DUX3Q96PT4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
DUX3Q96PT4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUX3Q96PT4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUX3Q96PT4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUX3Q96PT4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUX3Q96PT4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DUX3Q96PT4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.26■□□□□ 0.03
DUX3Q96PT4 TSPY15P-201ENST00000457163 923 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms