Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ITCHQ96J02 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITCHQ96J02 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITCHQ96J02 AC023632.3-201ENST00000521633 145 ntBASIC18.71■□□□□ 0.59
ITCHQ96J02 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITCHQ96J02 AC087623.3-201ENST00000607047 1098 ntBASIC18.71■□□□□ 0.59
ITCHQ96J02 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ITCHQ96J02 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.71■□□□□ 0.59
ITCHQ96J02 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITCHQ96J02 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ITCHQ96J02 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ITCHQ96J02 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ITCHQ96J02 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ITCHQ96J02 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
ITCHQ96J02 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITCHQ96J02 AL032819.2-201ENST00000624543 2162 ntBASIC18.71■□□□□ 0.59
ITCHQ96J02 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.71■□□□□ 0.59
ITCHQ96J02 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITCHQ96J02 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.7■□□□□ 0.58
ITCHQ96J02 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.7■□□□□ 0.58
ITCHQ96J02 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.7■□□□□ 0.58
ITCHQ96J02 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ITCHQ96J02 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ITCHQ96J02 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 AC120498.9-201ENST00000339021 3867 ntBASIC18.7■□□□□ 0.58
ITCHQ96J02 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.7■□□□□ 0.58
ITCHQ96J02 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 CYP2T1P-201ENST00000432607 1285 ntBASIC18.7■□□□□ 0.58
ITCHQ96J02 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.7■□□□□ 0.58
ITCHQ96J02 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.7■□□□□ 0.58
ITCHQ96J02 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.7■□□□□ 0.58
ITCHQ96J02 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.7■□□□□ 0.58
ITCHQ96J02 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.7■□□□□ 0.58
ITCHQ96J02 AL589743.5-201ENST00000616611 1050 ntBASIC18.7■□□□□ 0.58
ITCHQ96J02 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.7■□□□□ 0.58
ITCHQ96J02 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITCHQ96J02 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.7■□□□□ 0.58
ITCHQ96J02 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ITCHQ96J02 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.69■□□□□ 0.58
ITCHQ96J02 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ITCHQ96J02 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
ITCHQ96J02 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 AL355472.2-201ENST00000422958 438 ntBASIC18.69■□□□□ 0.58
ITCHQ96J02 KRT18P5-201ENST00000436075 1291 ntBASIC18.69■□□□□ 0.58
ITCHQ96J02 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.69■□□□□ 0.58
ITCHQ96J02 C2orf69P4-201ENST00000565394 541 ntBASIC18.69■□□□□ 0.58
ITCHQ96J02 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 AC011767.1-201ENST00000617410 1153 ntBASIC18.69■□□□□ 0.58
ITCHQ96J02 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ITCHQ96J02 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.69■□□□□ 0.58
ITCHQ96J02 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.69■□□□□ 0.58
ITCHQ96J02 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.69■□□□□ 0.58
ITCHQ96J02 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ITCHQ96J02 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.69■□□□□ 0.58
ITCHQ96J02 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ITCHQ96J02 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITCHQ96J02 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.69■□□□□ 0.58
ITCHQ96J02 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITCHQ96J02 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITCHQ96J02 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
ITCHQ96J02 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITCHQ96J02 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.68■□□□□ 0.58
ITCHQ96J02 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITCHQ96J02 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ITCHQ96J02 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.68■□□□□ 0.58
ITCHQ96J02 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITCHQ96J02 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.68■□□□□ 0.58
ITCHQ96J02 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ITCHQ96J02 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.68■□□□□ 0.58
ITCHQ96J02 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITCHQ96J02 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.68■□□□□ 0.58
ITCHQ96J02 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.68■□□□□ 0.58
ITCHQ96J02 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
ITCHQ96J02 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms