Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 C1QL1P1-201ENST00000568105 661 ntBASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 AF186192.3-201ENST00000583427 947 ntBASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 AL049637.2-201ENST00000641778 930 ntBASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCD1Q96GM5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCD1Q96GM5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 AP002982.1-201ENST00000492365 877 ntBASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 AL353708.3-201ENST00000610272 989 ntBASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.72■□□□□ 0.91
SMARCD1Q96GM5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 AC112907.3-201ENST00000577781 2400 ntBASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 AL596275.1-201ENST00000423464 877 ntBASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SMARCD1Q96GM5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.7■□□□□ 0.91
SMARCD1Q96GM5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 SNORA78-201ENST00000459373 127 ntBASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 AC113410.3-201ENST00000623366 203 ntBASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCD1Q96GM5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms