Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT43Q96FT9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 KRT16P6-202ENST00000425692 1426 ntBASIC20.22■□□□□ 0.83
IFT43Q96FT9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFT43Q96FT9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFT43Q96FT9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT43Q96FT9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT43Q96FT9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT43Q96FT9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT43Q96FT9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT43Q96FT9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFT43Q96FT9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.22■□□□□ 0.83
IFT43Q96FT9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
IFT43Q96FT9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
IFT43Q96FT9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
IFT43Q96FT9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
IFT43Q96FT9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT43Q96FT9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IFT43Q96FT9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
IFT43Q96FT9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT43Q96FT9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
IFT43Q96FT9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT43Q96FT9 AL390719.1-204ENST00000412397 1219 ntBASIC20.21■□□□□ 0.83
IFT43Q96FT9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.21■□□□□ 0.83
IFT43Q96FT9 AL158047.1-201ENST00000445918 881 ntBASIC20.21■□□□□ 0.83
IFT43Q96FT9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.21■□□□□ 0.83
IFT43Q96FT9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT43Q96FT9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT43Q96FT9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IFT43Q96FT9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT43Q96FT9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
IFT43Q96FT9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IFT43Q96FT9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IFT43Q96FT9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
IFT43Q96FT9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
IFT43Q96FT9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.2■□□□□ 0.82
IFT43Q96FT9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT43Q96FT9 PCDHAC2-203ENST00000615316 3011 ntBASIC20.2■□□□□ 0.82
IFT43Q96FT9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
IFT43Q96FT9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IFT43Q96FT9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT43Q96FT9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IFT43Q96FT9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT43Q96FT9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT43Q96FT9 KRT17P3-201ENST00000420566 1262 ntBASIC20.2■□□□□ 0.82
IFT43Q96FT9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.2■□□□□ 0.82
IFT43Q96FT9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.2■□□□□ 0.82
IFT43Q96FT9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
IFT43Q96FT9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT43Q96FT9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT43Q96FT9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT43Q96FT9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IFT43Q96FT9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
IFT43Q96FT9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
IFT43Q96FT9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IFT43Q96FT9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.2■□□□□ 0.82
IFT43Q96FT9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 UBE2SP1-201ENST00000450587 669 ntBASIC20.19■□□□□ 0.82
IFT43Q96FT9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.19■□□□□ 0.82
IFT43Q96FT9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.19■□□□□ 0.82
IFT43Q96FT9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT43Q96FT9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.18■□□□□ 0.82
IFT43Q96FT9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.18■□□□□ 0.82
IFT43Q96FT9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms