Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDCA5Q96FF9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.14■■□□□ 1.29
CDCA5Q96FF9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CDCA5Q96FF9 VENTXP5-201ENST00000523979 775 ntBASIC23.14■■□□□ 1.29
CDCA5Q96FF9 AL691432.3-201ENST00000621860 400 ntBASIC23.14■■□□□ 1.29
CDCA5Q96FF9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.14■■□□□ 1.29
CDCA5Q96FF9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDCA5Q96FF9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDCA5Q96FF9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDCA5Q96FF9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CDCA5Q96FF9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDCA5Q96FF9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.13■■□□□ 1.29
CDCA5Q96FF9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.13■■□□□ 1.29
CDCA5Q96FF9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDCA5Q96FF9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.13■■□□□ 1.29
CDCA5Q96FF9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.13■■□□□ 1.29
CDCA5Q96FF9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.13■■□□□ 1.29
CDCA5Q96FF9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 AL136038.3-201ENST00000561909 1096 ntBASIC23.12■■□□□ 1.29
CDCA5Q96FF9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.12■■□□□ 1.29
CDCA5Q96FF9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CDCA5Q96FF9 PHGDH-210ENST00000641115 1638 ntBASIC23.11■■□□□ 1.29
CDCA5Q96FF9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDCA5Q96FF9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 PLK5-205ENST00000642079 1969 ntBASIC23.1■■□□□ 1.29
CDCA5Q96FF9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CDCA5Q96FF9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDCA5Q96FF9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms