Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTP4Q96DX8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTP4Q96DX8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.07■□□□□ 0.8
RTP4Q96DX8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.07■□□□□ 0.8
RTP4Q96DX8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RTP4Q96DX8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.07■□□□□ 0.8
RTP4Q96DX8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.07■□□□□ 0.8
RTP4Q96DX8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTP4Q96DX8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTP4Q96DX8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTP4Q96DX8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTP4Q96DX8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTP4Q96DX8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTP4Q96DX8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RTP4Q96DX8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RTP4Q96DX8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
RTP4Q96DX8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTP4Q96DX8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.06■□□□□ 0.8
RTP4Q96DX8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.06■□□□□ 0.8
RTP4Q96DX8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTP4Q96DX8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTP4Q96DX8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTP4Q96DX8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.06■□□□□ 0.8
RTP4Q96DX8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RTP4Q96DX8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.06■□□□□ 0.8
RTP4Q96DX8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.06■□□□□ 0.8
RTP4Q96DX8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTP4Q96DX8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTP4Q96DX8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.06■□□□□ 0.8
RTP4Q96DX8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTP4Q96DX8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.06■□□□□ 0.8
RTP4Q96DX8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RTP4Q96DX8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.06■□□□□ 0.8
RTP4Q96DX8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTP4Q96DX8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTP4Q96DX8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTP4Q96DX8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTP4Q96DX8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.05■□□□□ 0.8
RTP4Q96DX8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.05■□□□□ 0.8
RTP4Q96DX8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.05■□□□□ 0.8
RTP4Q96DX8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.05■□□□□ 0.8
RTP4Q96DX8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
RTP4Q96DX8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.05■□□□□ 0.8
RTP4Q96DX8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.05■□□□□ 0.8
RTP4Q96DX8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTP4Q96DX8 AP000974.1-201ENST00000623909 2387 ntBASIC20.05■□□□□ 0.8
RTP4Q96DX8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTP4Q96DX8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTP4Q96DX8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTP4Q96DX8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTP4Q96DX8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTP4Q96DX8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RTP4Q96DX8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RTP4Q96DX8 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.04■□□□□ 0.8
RTP4Q96DX8 FAM201B-201ENST00000458407 597 ntBASIC20.04■□□□□ 0.8
RTP4Q96DX8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.04■□□□□ 0.8
RTP4Q96DX8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTP4Q96DX8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.04■□□□□ 0.8
RTP4Q96DX8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.04■□□□□ 0.8
RTP4Q96DX8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RTP4Q96DX8 AC087289.5-201ENST00000586076 3175 ntBASIC20.04■□□□□ 0.8
RTP4Q96DX8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTP4Q96DX8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RTP4Q96DX8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTP4Q96DX8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTP4Q96DX8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.04■□□□□ 0.8
RTP4Q96DX8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTP4Q96DX8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTP4Q96DX8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTP4Q96DX8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTP4Q96DX8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTP4Q96DX8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTP4Q96DX8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 HLA-B-256ENST00000639848 1089 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms