Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS33AQ96AX1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 AP001271.2-201ENST00000624018 1556 ntBASIC18.86■□□□□ 0.61
VPS33AQ96AX1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 MCRIP2P1-201ENST00000394346 511 ntBASIC18.86■□□□□ 0.61
VPS33AQ96AX1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VPS33AQ96AX1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 RARRES2P4-201ENST00000514074 484 ntBASIC18.85■□□□□ 0.61
VPS33AQ96AX1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS33AQ96AX1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 AC105020.6-201ENST00000621523 1217 ntBASIC18.84■□□□□ 0.61
VPS33AQ96AX1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VPS33AQ96AX1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms