Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 AC120498.8-201ENST00000614275 531 ntBASIC18.92■□□□□ 0.62
UBE2E3Q969T4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 SOX15-203ENST00000570788 1093 ntBASIC18.91■□□□□ 0.62
UBE2E3Q969T4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 TREX1-205ENST00000625293 1783 ntBASIC18.91■□□□□ 0.62
UBE2E3Q969T4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBE2E3Q969T4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 AC008687.6-201ENST00000596318 630 ntBASIC18.9■□□□□ 0.62
UBE2E3Q969T4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2E3Q969T4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.89■□□□□ 0.62
UBE2E3Q969T4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBE2E3Q969T4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.88■□□□□ 0.61
UBE2E3Q969T4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms