Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB40AQ8WXH6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 SLC29A4P1-201ENST00000398760 971 ntBASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 AC008694.1-202ENST00000636953 945 ntBASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40AQ8WXH6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 AL355802.2-201ENST00000402069 882 ntBASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 TSPY6P-201ENST00000448518 926 ntBASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 AC105036.2-201ENST00000569468 176 ntBASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 AL591742.1-201ENST00000604433 565 ntBASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40AQ8WXH6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 CYP2T1P-201ENST00000432607 1285 ntBASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 AC069236.1-201ENST00000604339 616 ntBASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 OR10C1-204ENST00000622521 1039 ntBASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40AQ8WXH6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms