Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 PRKY-204ENST00000533551 1019 ntBASIC20.84■□□□□ 0.93
UBA3Q8TBC4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
UBA3Q8TBC4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 C1QBPP2-201ENST00000528754 825 ntBASIC20.83■□□□□ 0.93
UBA3Q8TBC4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBA3Q8TBC4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBA3Q8TBC4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.83■□□□□ 0.92
UBA3Q8TBC4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBA3Q8TBC4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBA3Q8TBC4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBA3Q8TBC4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
UBA3Q8TBC4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBA3Q8TBC4 AP006587.1-201ENST00000534129 1502 ntBASIC20.83■□□□□ 0.92
UBA3Q8TBC4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBA3Q8TBC4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 KRASP1-201ENST00000407852 552 ntBASIC20.82■□□□□ 0.92
UBA3Q8TBC4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBA3Q8TBC4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 TMEM191A-211ENST00000637163 1067 ntBASIC20.81■□□□□ 0.92
UBA3Q8TBC4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBA3Q8TBC4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
UBA3Q8TBC4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBA3Q8TBC4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.8■□□□□ 0.92
UBA3Q8TBC4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBA3Q8TBC4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.8■□□□□ 0.92
UBA3Q8TBC4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBA3Q8TBC4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.8■□□□□ 0.92
UBA3Q8TBC4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
UBA3Q8TBC4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms