Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SMARCC2Q8TAQ2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 PRORSD1P-201ENST00000295112 541 ntBASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 KRT17P3-201ENST00000420566 1262 ntBASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 AC073648.6-201ENST00000641589 218 ntBASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMARCC2Q8TAQ2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 AC093484.2-201ENST00000580996 2166 ntBASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SMARCC2Q8TAQ2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.03■■□□□ 1.28
SMARCC2Q8TAQ2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 POM121L13P-201ENST00000422362 380 ntBASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SMARCC2Q8TAQ2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 AC005332.7-201ENST00000614046 2005 ntBASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.01■■□□□ 1.27
SMARCC2Q8TAQ2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms