Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 PMS2P1-201ENST00000431037 1228 ntBASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 PRELID1P1-202ENST00000567272 903 ntBASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC168Q8NDH2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 AP000523.1-201ENST00000398242 1049 ntBASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC168Q8NDH2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 SLC25A6P4-201ENST00000586535 553 ntBASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 KRT18P13-201ENST00000400056 1290 ntBASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.46■□□□□ 0.23
CCDC168Q8NDH2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.46■□□□□ 0.22
CCDC168Q8NDH2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC168Q8NDH2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.46■□□□□ 0.22
CCDC168Q8NDH2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CCDC168Q8NDH2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.46■□□□□ 0.22
CCDC168Q8NDH2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 STARP1-201ENST00000397973 869 ntBASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 AP002383.4-201ENST00000442518 975 ntBASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC168Q8NDH2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 HMGN1P19-201ENST00000436976 333 ntBASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 AL662844.1-201ENST00000546340 181 ntBASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCDC168Q8NDH2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms