Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
LINC00116Q8NCU8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.05■■□□□ 1.6
LINC00116Q8NCU8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
LINC00116Q8NCU8 ANKRD20A18P-201ENST00000359341 492 ntBASIC25.05■■□□□ 1.6
LINC00116Q8NCU8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC25.05■■□□□ 1.6
LINC00116Q8NCU8 AL359075.1-203ENST00000462729 1002 ntBASIC25.05■■□□□ 1.6
LINC00116Q8NCU8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
LINC00116Q8NCU8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LINC00116Q8NCU8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
LINC00116Q8NCU8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LINC00116Q8NCU8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC25.04■■□□□ 1.6
LINC00116Q8NCU8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC25.04■■□□□ 1.6
LINC00116Q8NCU8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.04■■□□□ 1.6
LINC00116Q8NCU8 AL023973.1-201ENST00000624619 620 ntBASIC25.04■■□□□ 1.6
LINC00116Q8NCU8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC25.04■■□□□ 1.6
LINC00116Q8NCU8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.04■■□□□ 1.6
LINC00116Q8NCU8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 AL353719.1-201ENST00000566847 864 ntBASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 AF106564.1-201ENST00000607058 2553 ntBASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINC00116Q8NCU8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 KRT18P38-201ENST00000449496 1282 ntBASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 AL671277.2-201ENST00000458060 996 ntBASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 AC005332.1-201ENST00000577698 1310 ntBASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
LINC00116Q8NCU8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 TSPY17P-201ENST00000450329 467 ntBASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 GXYLT1P6-201ENST00000456472 1187 ntBASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 TMEM179-206ENST00000616017 1645 ntBASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
LINC00116Q8NCU8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25■■□□□ 1.59
LINC00116Q8NCU8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
LINC00116Q8NCU8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
LINC00116Q8NCU8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC25■■□□□ 1.59
LINC00116Q8NCU8 HOMER2P1-201ENST00000455653 964 ntBASIC25■■□□□ 1.59
LINC00116Q8NCU8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
LINC00116Q8NCU8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC25■■□□□ 1.59
LINC00116Q8NCU8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC25■■□□□ 1.59
LINC00116Q8NCU8 AC116407.4-201ENST00000623319 1061 ntBASIC25■■□□□ 1.59
LINC00116Q8NCU8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LINC00116Q8NCU8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25■■□□□ 1.59
LINC00116Q8NCU8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LINC00116Q8NCU8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LINC00116Q8NCU8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC25■■□□□ 1.59
LINC00116Q8NCU8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LINC00116Q8NCU8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25■■□□□ 1.59
LINC00116Q8NCU8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
LINC00116Q8NCU8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25■■□□□ 1.59
LINC00116Q8NCU8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC24.99■■□□□ 1.59
LINC00116Q8NCU8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms