Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39CQ8N584 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39CQ8N584 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 AC124016.1-201ENST00000609552 612 ntBASIC20.94■□□□□ 0.94
TTC39CQ8N584 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.94■□□□□ 0.94
TTC39CQ8N584 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39CQ8N584 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39CQ8N584 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39CQ8N584 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.93■□□□□ 0.94
TTC39CQ8N584 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.93■□□□□ 0.94
TTC39CQ8N584 AC073130.3-201ENST00000624389 2278 ntBASIC20.93■□□□□ 0.94
TTC39CQ8N584 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39CQ8N584 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39CQ8N584 KRASP1-201ENST00000407852 552 ntBASIC20.93■□□□□ 0.94
TTC39CQ8N584 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.93■□□□□ 0.94
TTC39CQ8N584 TUBB8P6-201ENST00000436895 1288 ntBASIC20.93■□□□□ 0.94
TTC39CQ8N584 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39CQ8N584 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.93■□□□□ 0.94
TTC39CQ8N584 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39CQ8N584 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39CQ8N584 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39CQ8N584 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.93■□□□□ 0.94
TTC39CQ8N584 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.93■□□□□ 0.94
TTC39CQ8N584 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39CQ8N584 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.93■□□□□ 0.94
TTC39CQ8N584 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39CQ8N584 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TTC39CQ8N584 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TTC39CQ8N584 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39CQ8N584 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39CQ8N584 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TTC39CQ8N584 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39CQ8N584 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39CQ8N584 KRT16P5-201ENST00000455284 522 ntBASIC20.92■□□□□ 0.94
TTC39CQ8N584 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.92■□□□□ 0.94
TTC39CQ8N584 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TTC39CQ8N584 RPPH1-201ENST00000516869 333 ntBASIC20.92■□□□□ 0.94
TTC39CQ8N584 C1QBPP2-201ENST00000528754 825 ntBASIC20.92■□□□□ 0.94
TTC39CQ8N584 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.92■□□□□ 0.94
TTC39CQ8N584 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.92■□□□□ 0.94
TTC39CQ8N584 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TTC39CQ8N584 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.92■□□□□ 0.94
TTC39CQ8N584 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
TTC39CQ8N584 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39CQ8N584 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39CQ8N584 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39CQ8N584 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.92■□□□□ 0.94
TTC39CQ8N584 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39CQ8N584 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39CQ8N584 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 PRORSD1P-201ENST00000295112 541 ntBASIC20.91■□□□□ 0.94
TTC39CQ8N584 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 TMEM191A-211ENST00000637163 1067 ntBASIC20.91■□□□□ 0.94
TTC39CQ8N584 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39CQ8N584 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TTC39CQ8N584 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39CQ8N584 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
TTC39CQ8N584 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39CQ8N584 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.9■□□□□ 0.94
TTC39CQ8N584 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.9■□□□□ 0.94
TTC39CQ8N584 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.9■□□□□ 0.94
TTC39CQ8N584 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
TTC39CQ8N584 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39CQ8N584 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TTC39CQ8N584 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39CQ8N584 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.9■□□□□ 0.94
TTC39CQ8N584 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
TTC39CQ8N584 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.89■□□□□ 0.94
TTC39CQ8N584 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.89■□□□□ 0.94
TTC39CQ8N584 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TTC39CQ8N584 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
TTC39CQ8N584 KRT8P8-201ENST00000434750 1448 ntBASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms