Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.02■□□□□ 0.8
SYNPOQ8N3V7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNPOQ8N3V7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
SYNPOQ8N3V7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNPOQ8N3V7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYNPOQ8N3V7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.02■□□□□ 0.79
SYNPOQ8N3V7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 TFP1-202ENST00000475455 1573 ntBASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 PKD1P6-201ENST00000343738 4769 ntBASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 ECEL1P2-202ENST00000465689 757 ntBASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 AC011506.1-201ENST00000474329 610 ntBASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SYNPOQ8N3V7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNPOQ8N3V7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPOQ8N3V7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPOQ8N3V7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPOQ8N3V7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20■□□□□ 0.79
SYNPOQ8N3V7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPOQ8N3V7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20■□□□□ 0.79
SYNPOQ8N3V7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20■□□□□ 0.79
SYNPOQ8N3V7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPOQ8N3V7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPOQ8N3V7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SYNPOQ8N3V7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPOQ8N3V7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPOQ8N3V7 CRYGFP-201ENST00000418459 633 ntBASIC20■□□□□ 0.79
SYNPOQ8N3V7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20■□□□□ 0.79
SYNPOQ8N3V7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20■□□□□ 0.79
SYNPOQ8N3V7 WWOX-216ENST00000569818 525 ntBASIC20■□□□□ 0.79
SYNPOQ8N3V7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20■□□□□ 0.79
SYNPOQ8N3V7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNPOQ8N3V7 KRT16P6-202ENST00000425692 1426 ntBASIC20■□□□□ 0.79
SYNPOQ8N3V7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SYNPOQ8N3V7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNPOQ8N3V7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20■□□□□ 0.79
SYNPOQ8N3V7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20■□□□□ 0.79
SYNPOQ8N3V7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 AC130371.2-201ENST00000619443 611 ntBASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNPOQ8N3V7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 AP000692.2-201ENST00000608391 879 ntBASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNPOQ8N3V7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPOQ8N3V7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms