Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.39■■□□□ 1.49
SMC5Q8IY18 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.38■■□□□ 1.49
SMC5Q8IY18 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.38■■□□□ 1.49
SMC5Q8IY18 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMC5Q8IY18 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMC5Q8IY18 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.38■■□□□ 1.49
SMC5Q8IY18 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.38■■□□□ 1.49
SMC5Q8IY18 AL138781.1-201ENST00000566567 1274 ntBASIC24.38■■□□□ 1.49
SMC5Q8IY18 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.38■■□□□ 1.49
SMC5Q8IY18 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.38■■□□□ 1.49
SMC5Q8IY18 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMC5Q8IY18 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC24.38■■□□□ 1.49
SMC5Q8IY18 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC24.38■■□□□ 1.49
SMC5Q8IY18 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.38■■□□□ 1.49
SMC5Q8IY18 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.38■■□□□ 1.49
SMC5Q8IY18 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMC5Q8IY18 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMC5Q8IY18 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC24.38■■□□□ 1.49
SMC5Q8IY18 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC24.37■■□□□ 1.49
SMC5Q8IY18 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMC5Q8IY18 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SMC5Q8IY18 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMC5Q8IY18 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMC5Q8IY18 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMC5Q8IY18 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMC5Q8IY18 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.37■■□□□ 1.49
SMC5Q8IY18 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SMC5Q8IY18 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMC5Q8IY18 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC24.36■■□□□ 1.49
SMC5Q8IY18 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
SMC5Q8IY18 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMC5Q8IY18 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMC5Q8IY18 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.36■■□□□ 1.49
SMC5Q8IY18 RPS2P52-201ENST00000469610 820 ntBASIC24.36■■□□□ 1.49
SMC5Q8IY18 AC097658.1-201ENST00000475555 843 ntBASIC24.36■■□□□ 1.49
SMC5Q8IY18 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.36■■□□□ 1.49
SMC5Q8IY18 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.36■■□□□ 1.49
SMC5Q8IY18 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.36■■□□□ 1.49
SMC5Q8IY18 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMC5Q8IY18 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMC5Q8IY18 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMC5Q8IY18 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.36■■□□□ 1.49
SMC5Q8IY18 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMC5Q8IY18 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.36■■□□□ 1.49
SMC5Q8IY18 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMC5Q8IY18 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMC5Q8IY18 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.35■■□□□ 1.49
SMC5Q8IY18 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.35■■□□□ 1.49
SMC5Q8IY18 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SMC5Q8IY18 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.35■■□□□ 1.49
SMC5Q8IY18 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.35■■□□□ 1.49
SMC5Q8IY18 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC24.35■■□□□ 1.49
SMC5Q8IY18 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SMC5Q8IY18 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
SMC5Q8IY18 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.35■■□□□ 1.49
SMC5Q8IY18 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
SMC5Q8IY18 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMC5Q8IY18 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMC5Q8IY18 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMC5Q8IY18 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMC5Q8IY18 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMC5Q8IY18 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SMC5Q8IY18 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.34■■□□□ 1.49
SMC5Q8IY18 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.34■■□□□ 1.49
SMC5Q8IY18 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SMC5Q8IY18 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.34■■□□□ 1.49
SMC5Q8IY18 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.34■■□□□ 1.49
SMC5Q8IY18 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.34■■□□□ 1.49
SMC5Q8IY18 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
SMC5Q8IY18 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC24.34■■□□□ 1.49
SMC5Q8IY18 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMC5Q8IY18 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SMC5Q8IY18 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
SMC5Q8IY18 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.34■■□□□ 1.49
SMC5Q8IY18 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SMC5Q8IY18 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMC5Q8IY18 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.33■■□□□ 1.49
SMC5Q8IY18 AC092368.3-202ENST00000574180 1591 ntBASIC24.33■■□□□ 1.49
SMC5Q8IY18 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.33■■□□□ 1.49
SMC5Q8IY18 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMC5Q8IY18 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMC5Q8IY18 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMC5Q8IY18 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SMC5Q8IY18 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.33■■□□□ 1.49
SMC5Q8IY18 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.33■■□□□ 1.49
SMC5Q8IY18 PNMA6B-201ENST00000538162 1200 ntBASIC24.33■■□□□ 1.49
SMC5Q8IY18 AC060766.5-201ENST00000590539 871 ntBASIC24.33■■□□□ 1.49
SMC5Q8IY18 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms