Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC010980.2-201ENST00000587099 1412 ntBASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 TREX1-205ENST00000625293 1783 ntBASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 HLA-G-202ENST00000376815 851 ntBASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 HLA-G-203ENST00000376818 1127 ntBASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 OR10C1-204ENST00000622521 1039 ntBASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC50Q8IVM0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 AC009237.14-201ENST00000609975 1594 ntBASIC20.72■□□□□ 0.91
CCDC50Q8IVM0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 AC093787.1-201ENST00000450396 207 ntBASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 AC022517.1-201ENST00000592429 346 ntBASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 AC005181.1-201ENST00000604782 1256 ntBASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC50Q8IVM0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.7■□□□□ 0.91
CCDC50Q8IVM0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC50Q8IVM0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC50Q8IVM0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 KRT17P1-201ENST00000399211 1546 ntBASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 AC004911.1-201ENST00000416316 871 ntBASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC50Q8IVM0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms