Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 UBE2DNL-204ENST00000602536 740 ntBASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NUDCD3Q8IVD9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NUDCD3Q8IVD9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
NUDCD3Q8IVD9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NUDCD3Q8IVD9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.52■□□□□ 0.71
NUDCD3Q8IVD9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
NUDCD3Q8IVD9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
NUDCD3Q8IVD9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NUDCD3Q8IVD9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NUDCD3Q8IVD9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
NUDCD3Q8IVD9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
NUDCD3Q8IVD9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 KRT8P20-201ENST00000423953 1409 ntBASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 KRT19P1-201ENST00000405746 1186 ntBASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUDCD3Q8IVD9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 YBX1P1-201ENST00000445822 960 ntBASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 MYCNOS-205ENST00000641950 531 ntBASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUDCD3Q8IVD9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 AC005837.3-201ENST00000612163 286 ntBASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NUDCD3Q8IVD9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.48■□□□□ 0.71
NUDCD3Q8IVD9 TERF1P5-201ENST00000477545 1207 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms