Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PTBP1P-201ENST00000554374 1601 ntBASIC17.75■□□□□ 0.43
SHFQ7M4L6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHFQ7M4L6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SHFQ7M4L6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.74■□□□□ 0.43
SHFQ7M4L6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SHFQ7M4L6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.74■□□□□ 0.43
SHFQ7M4L6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.74■□□□□ 0.43
SHFQ7M4L6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.74■□□□□ 0.43
SHFQ7M4L6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SHFQ7M4L6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SHFQ7M4L6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.74■□□□□ 0.43
SHFQ7M4L6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.74■□□□□ 0.43
SHFQ7M4L6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHFQ7M4L6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHFQ7M4L6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHFQ7M4L6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHFQ7M4L6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHFQ7M4L6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHFQ7M4L6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHFQ7M4L6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHFQ7M4L6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 AC100791.3-201ENST00000617619 330 ntBASIC17.73■□□□□ 0.43
SHFQ7M4L6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHFQ7M4L6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHFQ7M4L6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHFQ7M4L6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SHFQ7M4L6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 MIR6821-201ENST00000617625 74 ntBASIC17.72■□□□□ 0.43
SHFQ7M4L6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHFQ7M4L6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SHFQ7M4L6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.71■□□□□ 0.43
SHFQ7M4L6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SHFQ7M4L6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHFQ7M4L6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms