Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC10.59□□□□□ -0.71
LCA10Q71F78 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC10.59□□□□□ -0.71
LCA10Q71F78 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
LCA10Q71F78 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC10.59□□□□□ -0.71
LCA10Q71F78 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC10.59□□□□□ -0.71
LCA10Q71F78 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
LCA10Q71F78 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
LCA10Q71F78 AC104564.3-201ENST00000582367 638 ntBASIC10.59□□□□□ -0.71
LCA10Q71F78 AL451085.2-201ENST00000605085 799 ntBASIC10.59□□□□□ -0.71
LCA10Q71F78 MIR6724-1-201ENST00000616420 92 ntBASIC10.59□□□□□ -0.71
LCA10Q71F78 MIR6724-2-201ENST00000616483 92 ntBASIC10.59□□□□□ -0.71
LCA10Q71F78 MIR6724-4-201ENST00000617390 92 ntBASIC10.59□□□□□ -0.71
LCA10Q71F78 MIR6724-3-201ENST00000622482 92 ntBASIC10.59□□□□□ -0.71
LCA10Q71F78 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
LCA10Q71F78 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LCA10Q71F78 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LCA10Q71F78 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
LCA10Q71F78 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
LCA10Q71F78 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC10.59□□□□□ -0.71
LCA10Q71F78 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
LCA10Q71F78 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC10.59□□□□□ -0.71
LCA10Q71F78 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LCA10Q71F78 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LCA10Q71F78 GTSE1-AS1-202ENST00000623117 1518 ntBASIC10.58□□□□□ -0.72
LCA10Q71F78 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
LCA10Q71F78 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC10.58□□□□□ -0.72
LCA10Q71F78 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
LCA10Q71F78 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC10.58□□□□□ -0.72
LCA10Q71F78 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
LCA10Q71F78 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC10.58□□□□□ -0.72
LCA10Q71F78 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
LCA10Q71F78 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.58□□□□□ -0.72
LCA10Q71F78 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LCA10Q71F78 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC10.58□□□□□ -0.72
LCA10Q71F78 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC10.58□□□□□ -0.72
LCA10Q71F78 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 AK3-203ENST00000447596 705 ntTSL 2 BASIC10.58□□□□□ -0.72
LCA10Q71F78 AC009299.2-201ENST00000482477 511 ntBASIC10.58□□□□□ -0.72
LCA10Q71F78 pRNA.6-201ENST00000610482 90 ntBASIC10.58□□□□□ -0.72
LCA10Q71F78 pRNA.5-201ENST00000612139 90 ntBASIC10.58□□□□□ -0.72
LCA10Q71F78 pRNA.11-201ENST00000618423 90 ntBASIC10.58□□□□□ -0.72
LCA10Q71F78 pRNA.13-201ENST00000619112 90 ntBASIC10.58□□□□□ -0.72
LCA10Q71F78 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LCA10Q71F78 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
LCA10Q71F78 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
LCA10Q71F78 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
LCA10Q71F78 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LCA10Q71F78 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC10.58□□□□□ -0.72
LCA10Q71F78 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LCA10Q71F78 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC10.58□□□□□ -0.72
LCA10Q71F78 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LCA10Q71F78 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LCA10Q71F78 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
LCA10Q71F78 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC10.57□□□□□ -0.72
LCA10Q71F78 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC10.57□□□□□ -0.72
LCA10Q71F78 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC10.57□□□□□ -0.72
LCA10Q71F78 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LCA10Q71F78 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LCA10Q71F78 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LCA10Q71F78 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LCA10Q71F78 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LCA10Q71F78 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LCA10Q71F78 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC10.57□□□□□ -0.72
LCA10Q71F78 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LCA10Q71F78 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
LCA10Q71F78 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LCA10Q71F78 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms