Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.73■□□□□ 0.75
CDHR3Q6ZTQ4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 CD99P1-205ENST00000527459 561 ntBASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 CYP2T3P-201ENST00000601990 817 ntBASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDHR3Q6ZTQ4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 KRT17P1-201ENST00000399211 1546 ntBASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 KRT8P17-201ENST00000453110 1448 ntBASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 MCRIP2P1-201ENST00000394346 511 ntBASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 LSM12P1-201ENST00000411836 588 ntBASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDHR3Q6ZTQ4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.7■□□□□ 0.74
CDHR3Q6ZTQ4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms