Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM53Q6P2H8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM53Q6P2H8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 PLK5-205ENST00000642079 1969 ntBASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 CYP2T1P-201ENST00000432607 1285 ntBASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 CDCA4P2-201ENST00000441182 718 ntBASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM53Q6P2H8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 PGM5P4-201ENST00000421970 445 ntBASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 RARRES2P4-201ENST00000514074 484 ntBASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM53Q6P2H8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 AC016405.3-201ENST00000607710 860 ntBASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 OR10C1-204ENST00000622521 1039 ntBASIC17.91■□□□□ 0.46
TMEM53Q6P2H8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms