Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDPF1Q6NVV7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDPF1Q6NVV7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDPF1Q6NVV7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.94□□□□□ -0.02
CDPF1Q6NVV7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 TREX1-205ENST00000625293 1783 ntBASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 MIR939-201ENST00000401314 82 ntBASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 AF213884.3-201ENST00000563833 479 ntBASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 AC090164.3-201ENST00000610780 2143 ntBASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDPF1Q6NVV7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 AC105265.2-201ENST00000467189 838 ntBASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 AC027682.1-201ENST00000562846 899 ntBASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 AC011298.3-201ENST00000615796 283 ntBASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 AC241377.3-202ENST00000626088 1088 ntBASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 AC241585.3-202ENST00000628937 1088 ntBASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 AC245100.8-202ENST00000629247 1058 ntBASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 AC121338.2-201ENST00000622535 1744 ntBASIC14.92□□□□□ -0.02
CDPF1Q6NVV7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 AP001330.3-201ENST00000520123 633 ntBASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.91□□□□□ -0.02
CDPF1Q6NVV7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDPF1Q6NVV7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms