Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
KRT40Q6A162 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.78■■□□□ 1.24
KRT40Q6A162 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.78■■□□□ 1.24
KRT40Q6A162 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.78■■□□□ 1.24
KRT40Q6A162 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.78■■□□□ 1.24
KRT40Q6A162 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
KRT40Q6A162 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.78■■□□□ 1.24
KRT40Q6A162 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.78■■□□□ 1.24
KRT40Q6A162 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.78■■□□□ 1.24
KRT40Q6A162 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.78■■□□□ 1.24
KRT40Q6A162 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
KRT40Q6A162 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KRT40Q6A162 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.77■■□□□ 1.24
KRT40Q6A162 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
KRT40Q6A162 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
KRT40Q6A162 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
KRT40Q6A162 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
KRT40Q6A162 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
KRT40Q6A162 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
KRT40Q6A162 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.77■■□□□ 1.24
KRT40Q6A162 AC026366.1-201ENST00000488803 879 ntBASIC22.77■■□□□ 1.24
KRT40Q6A162 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.77■■□□□ 1.24
KRT40Q6A162 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.77■■□□□ 1.24
KRT40Q6A162 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
KRT40Q6A162 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.77■■□□□ 1.24
KRT40Q6A162 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
KRT40Q6A162 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.76■■□□□ 1.23
KRT40Q6A162 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
KRT40Q6A162 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
KRT40Q6A162 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
KRT40Q6A162 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.76■■□□□ 1.23
KRT40Q6A162 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.76■■□□□ 1.23
KRT40Q6A162 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
KRT40Q6A162 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
KRT40Q6A162 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
KRT40Q6A162 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.76■■□□□ 1.23
KRT40Q6A162 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
KRT40Q6A162 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.76■■□□□ 1.23
KRT40Q6A162 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.76■■□□□ 1.23
KRT40Q6A162 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.76■■□□□ 1.23
KRT40Q6A162 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.76■■□□□ 1.23
KRT40Q6A162 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.76■■□□□ 1.23
KRT40Q6A162 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.76■■□□□ 1.23
KRT40Q6A162 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.76■■□□□ 1.23
KRT40Q6A162 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.76■■□□□ 1.23
KRT40Q6A162 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.76■■□□□ 1.23
KRT40Q6A162 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
KRT40Q6A162 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
KRT40Q6A162 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.76■■□□□ 1.23
KRT40Q6A162 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
KRT40Q6A162 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
KRT40Q6A162 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
KRT40Q6A162 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
KRT40Q6A162 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
KRT40Q6A162 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.75■■□□□ 1.23
KRT40Q6A162 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.75■■□□□ 1.23
KRT40Q6A162 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
KRT40Q6A162 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
KRT40Q6A162 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
KRT40Q6A162 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
KRT40Q6A162 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
KRT40Q6A162 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
KRT40Q6A162 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
KRT40Q6A162 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
KRT40Q6A162 UNC93B5-201ENST00000530315 699 ntBASIC22.75■■□□□ 1.23
KRT40Q6A162 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.75■■□□□ 1.23
KRT40Q6A162 TFP1-202ENST00000475455 1573 ntBASIC22.75■■□□□ 1.23
KRT40Q6A162 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
KRT40Q6A162 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
KRT40Q6A162 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
KRT40Q6A162 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.74■■□□□ 1.23
KRT40Q6A162 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
KRT40Q6A162 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
KRT40Q6A162 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
KRT40Q6A162 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
KRT40Q6A162 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
KRT40Q6A162 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.74■■□□□ 1.23
KRT40Q6A162 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
KRT40Q6A162 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
KRT40Q6A162 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.74■■□□□ 1.23
KRT40Q6A162 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.74■■□□□ 1.23
KRT40Q6A162 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.74■■□□□ 1.23
KRT40Q6A162 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.74■■□□□ 1.23
KRT40Q6A162 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
KRT40Q6A162 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
KRT40Q6A162 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.74■■□□□ 1.23
KRT40Q6A162 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
KRT40Q6A162 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms