Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RNF213Q63HN8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 TSSC2-201ENST00000450217 709 ntBASIC10.57□□□□□ -0.72
RNF213Q63HN8 GXYLT1P6-201ENST00000456472 1187 ntBASIC10.57□□□□□ -0.72
RNF213Q63HN8 RPL13AP23-201ENST00000480739 586 ntBASIC10.57□□□□□ -0.72
RNF213Q63HN8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 KRT18P67-201ENST00000432816 1264 ntBASIC10.57□□□□□ -0.72
RNF213Q63HN8 AC073648.2-201ENST00000510116 352 ntBASIC10.57□□□□□ -0.72
RNF213Q63HN8 AP000867.3-201ENST00000524675 377 ntBASIC10.57□□□□□ -0.72
RNF213Q63HN8 MIR1199-201ENST00000621445 119 ntBASIC10.57□□□□□ -0.72
RNF213Q63HN8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 BMF-207ENST00000559701 630 ntTSL 3 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 AL353801.3-201ENST00000609898 542 ntBASIC10.57□□□□□ -0.72
RNF213Q63HN8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
RNF213Q63HN8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RNF213Q63HN8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 KRT18P28-201ENST00000453838 1332 ntBASIC10.56□□□□□ -0.72
RNF213Q63HN8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 LINC00265-3P-201ENST00000447588 903 ntBASIC10.56□□□□□ -0.72
RNF213Q63HN8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 AC004967.1-201ENST00000453589 447 ntBASIC10.56□□□□□ -0.72
RNF213Q63HN8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 AL162741.1-201ENST00000565563 1558 ntBASIC10.56□□□□□ -0.72
RNF213Q63HN8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RNF213Q63HN8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC10.56□□□□□ -0.72
RNF213Q63HN8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RNF213Q63HN8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RNF213Q63HN8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RNF213Q63HN8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RNF213Q63HN8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RNF213Q63HN8 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.55□□□□□ -0.72
RNF213Q63HN8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RNF213Q63HN8 AC139530.1-201ENST00000575312 1977 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms