Protein–RNA interactions for Protein: Q5VW36

FOCAD, Focadhesin, humanhuman

Predictions only

Length 1,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOCADQ5VW36 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.2■■□□□ 1.3
FOCADQ5VW36 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
FOCADQ5VW36 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOCADQ5VW36 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC23.19■■□□□ 1.3
FOCADQ5VW36 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOCADQ5VW36 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOCADQ5VW36 AC131212.4-201ENST00000623606 975 ntBASIC23.19■■□□□ 1.3
FOCADQ5VW36 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOCADQ5VW36 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FOCADQ5VW36 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FOCADQ5VW36 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FOCADQ5VW36 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
FOCADQ5VW36 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.19■■□□□ 1.3
FOCADQ5VW36 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.19■■□□□ 1.3
FOCADQ5VW36 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.19■■□□□ 1.3
FOCADQ5VW36 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
FOCADQ5VW36 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOCADQ5VW36 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.19■■□□□ 1.3
FOCADQ5VW36 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.18■■□□□ 1.3
FOCADQ5VW36 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOCADQ5VW36 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FOCADQ5VW36 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
FOCADQ5VW36 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.18■■□□□ 1.3
FOCADQ5VW36 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC23.18■■□□□ 1.3
FOCADQ5VW36 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.18■■□□□ 1.3
FOCADQ5VW36 AC010331.1-201ENST00000611423 582 ntBASIC23.18■■□□□ 1.3
FOCADQ5VW36 AC092865.7-201ENST00000641832 219 ntBASIC23.18■■□□□ 1.3
FOCADQ5VW36 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.18■■□□□ 1.3
FOCADQ5VW36 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
FOCADQ5VW36 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.18■■□□□ 1.3
FOCADQ5VW36 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOCADQ5VW36 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOCADQ5VW36 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOCADQ5VW36 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FOCADQ5VW36 TERF1P1-201ENST00000311003 1181 ntBASIC23.17■■□□□ 1.3
FOCADQ5VW36 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 LINC01568-207ENST00000641790 1380 ntBASIC23.17■■□□□ 1.3
FOCADQ5VW36 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOCADQ5VW36 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FOCADQ5VW36 AC097488.1-201ENST00000507834 756 ntBASIC23.17■■□□□ 1.3
FOCADQ5VW36 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.17■■□□□ 1.3
FOCADQ5VW36 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOCADQ5VW36 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOCADQ5VW36 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.16■■□□□ 1.3
FOCADQ5VW36 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.16■■□□□ 1.3
FOCADQ5VW36 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
FOCADQ5VW36 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
FOCADQ5VW36 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOCADQ5VW36 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOCADQ5VW36 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOCADQ5VW36 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
FOCADQ5VW36 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.16■■□□□ 1.3
FOCADQ5VW36 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.16■■□□□ 1.3
FOCADQ5VW36 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
FOCADQ5VW36 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
FOCADQ5VW36 AC004951.3-201ENST00000418645 1148 ntBASIC23.16■■□□□ 1.3
FOCADQ5VW36 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.16■■□□□ 1.3
FOCADQ5VW36 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.16■■□□□ 1.3
FOCADQ5VW36 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.16■■□□□ 1.3
FOCADQ5VW36 KRT18P57-201ENST00000443599 1254 ntBASIC23.16■■□□□ 1.3
FOCADQ5VW36 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOCADQ5VW36 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
FOCADQ5VW36 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOCADQ5VW36 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.15■■□□□ 1.3
FOCADQ5VW36 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOCADQ5VW36 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
FOCADQ5VW36 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOCADQ5VW36 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOCADQ5VW36 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
FOCADQ5VW36 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.15■■□□□ 1.3
FOCADQ5VW36 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOCADQ5VW36 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOCADQ5VW36 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.15■■□□□ 1.3
FOCADQ5VW36 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.15■■□□□ 1.3
FOCADQ5VW36 TMPOP1-202ENST00000424642 1267 ntBASIC23.15■■□□□ 1.3
FOCADQ5VW36 NAPSB-206ENST00000562112 1266 ntBASIC23.15■■□□□ 1.3
FOCADQ5VW36 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.15■■□□□ 1.3
FOCADQ5VW36 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOCADQ5VW36 AC009237.14-201ENST00000609975 1594 ntBASIC23.15■■□□□ 1.3
FOCADQ5VW36 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOCADQ5VW36 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.15■■□□□ 1.3
FOCADQ5VW36 FAM207BP-201ENST00000447172 505 ntBASIC23.15■■□□□ 1.3
FOCADQ5VW36 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
FOCADQ5VW36 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.3
FOCADQ5VW36 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.14■■□□□ 1.3
FOCADQ5VW36 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.14■■□□□ 1.29
FOCADQ5VW36 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.14■■□□□ 1.29
FOCADQ5VW36 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms