Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.44■□□□□ 0.86
LRRC38Q5VT99 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 AC097658.1-201ENST00000475555 843 ntBASIC20.43■□□□□ 0.86
LRRC38Q5VT99 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.43■□□□□ 0.86
LRRC38Q5VT99 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC38Q5VT99 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRC38Q5VT99 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 RPS2P52-201ENST00000469610 820 ntBASIC20.41■□□□□ 0.86
LRRC38Q5VT99 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 AC006557.6-201ENST00000623071 864 ntBASIC20.41■□□□□ 0.86
LRRC38Q5VT99 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LRRC38Q5VT99 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC38Q5VT99 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC38Q5VT99 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
LRRC38Q5VT99 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.39■□□□□ 0.86
LRRC38Q5VT99 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC38Q5VT99 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LRRC38Q5VT99 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRC38Q5VT99 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms