Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 TSPY6P-201ENST00000448518 926 ntBASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 AL356652.1-201ENST00000615962 565 ntBASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF1Q5TC12 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATPAF1Q5TC12 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATPAF1Q5TC12 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ATPAF1Q5TC12 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
ATPAF1Q5TC12 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ATPAF1Q5TC12 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ATPAF1Q5TC12 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ATPAF1Q5TC12 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATPAF1Q5TC12 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ATPAF1Q5TC12 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 GUSBP6-202ENST00000438529 1198 ntBASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.01■□□□□ 0.31
ATPAF1Q5TC12 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATPAF1Q5TC12 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ATPAF1Q5TC12 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17■□□□□ 0.31
ATPAF1Q5TC12 TMEM179-206ENST00000616017 1645 ntBASIC17■□□□□ 0.31
ATPAF1Q5TC12 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATPAF1Q5TC12 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ATPAF1Q5TC12 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms