Protein–RNA interactions for Protein: Q4ZHG4

FNDC1, Fibronectin type III domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1Q4ZHG4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 TMEM179-206ENST00000616017 1645 ntBASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FNDC1Q4ZHG4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 KRT8P8-201ENST00000434750 1448 ntBASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 MYC-208ENST00000641036 567 ntBASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 HMGA1P5-201ENST00000412453 271 ntBASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 AC004951.3-201ENST00000418645 1148 ntBASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.09■□□□□ 0.97
FNDC1Q4ZHG4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 FAM207BP-201ENST00000447172 505 ntBASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FNDC1Q4ZHG4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
FNDC1Q4ZHG4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
FNDC1Q4ZHG4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
FNDC1Q4ZHG4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.08■□□□□ 0.96
FNDC1Q4ZHG4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FNDC1Q4ZHG4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 MFAP1P1-201ENST00000442257 1255 ntBASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 AL590326.2-201ENST00000625139 305 ntBASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 SMG8-203ENST00000578922 2178 ntBASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 AC007663.1-201ENST00000438948 1240 ntBASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 SLC25A1P4-201ENST00000567977 778 ntBASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 AC011298.2-201ENST00000617989 482 ntBASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FNDC1Q4ZHG4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 Z85996.1-201ENST00000494644 937 ntBASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 EGLN1P1-201ENST00000531623 762 ntBASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FNDC1Q4ZHG4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms