Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO1Q2MKA7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO1Q2MKA7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RSPO1Q2MKA7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO1Q2MKA7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RSPO1Q2MKA7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO1Q2MKA7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 AL121829.2-201ENST00000620908 328 ntBASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.03■□□□□ 0.32
RSPO1Q2MKA7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO1Q2MKA7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RSPO1Q2MKA7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
RSPO1Q2MKA7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RSPO1Q2MKA7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RSPO1Q2MKA7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RSPO1Q2MKA7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO1Q2MKA7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms