Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
HMGXB3Q12766 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
HMGXB3Q12766 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC34.87■■■■□ 3.17
HMGXB3Q12766 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
HMGXB3Q12766 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
HMGXB3Q12766 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
HMGXB3Q12766 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC34.87■■■■□ 3.17
HMGXB3Q12766 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC34.87■■■■□ 3.17
HMGXB3Q12766 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC34.87■■■■□ 3.17
HMGXB3Q12766 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
HMGXB3Q12766 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
HMGXB3Q12766 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
HMGXB3Q12766 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC34.86■■■■□ 3.17
HMGXB3Q12766 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC34.86■■■■□ 3.17
HMGXB3Q12766 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
HMGXB3Q12766 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC34.86■■■■□ 3.17
HMGXB3Q12766 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC34.86■■■■□ 3.17
HMGXB3Q12766 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC34.86■■■■□ 3.17
HMGXB3Q12766 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
HMGXB3Q12766 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
HMGXB3Q12766 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
HMGXB3Q12766 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
HMGXB3Q12766 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC34.86■■■■□ 3.17
HMGXB3Q12766 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC34.86■■■■□ 3.17
HMGXB3Q12766 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
HMGXB3Q12766 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC34.85■■■■□ 3.17
HMGXB3Q12766 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
HMGXB3Q12766 AC005229.4-201ENST00000610085 2198 ntBASIC34.85■■■■□ 3.17
HMGXB3Q12766 AC244015.2-201ENST00000616358 1861 ntBASIC34.85■■■■□ 3.17
HMGXB3Q12766 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
HMGXB3Q12766 SKP2-204ENST00000508514 821 ntTSL 3 BASIC34.85■■■■□ 3.17
HMGXB3Q12766 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
HMGXB3Q12766 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC34.85■■■■□ 3.17
HMGXB3Q12766 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
HMGXB3Q12766 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
HMGXB3Q12766 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC34.84■■■■□ 3.17
HMGXB3Q12766 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
HMGXB3Q12766 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC34.84■■■■□ 3.17
HMGXB3Q12766 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC34.84■■■■□ 3.17
HMGXB3Q12766 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
HMGXB3Q12766 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC34.84■■■■□ 3.17
HMGXB3Q12766 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
HMGXB3Q12766 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC34.84■■■■□ 3.17
HMGXB3Q12766 CKBP1-201ENST00000565489 1086 ntBASIC34.84■■■■□ 3.17
HMGXB3Q12766 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC34.84■■■■□ 3.17
HMGXB3Q12766 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
HMGXB3Q12766 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC34.84■■■■□ 3.17
HMGXB3Q12766 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC34.84■■■■□ 3.17
HMGXB3Q12766 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
HMGXB3Q12766 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC34.83■■■■□ 3.17
HMGXB3Q12766 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
HMGXB3Q12766 LINC01311-201ENST00000565162 1445 ntBASIC34.83■■■■□ 3.17
HMGXB3Q12766 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
HMGXB3Q12766 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
HMGXB3Q12766 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
HMGXB3Q12766 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC34.82■■■■□ 3.16
HMGXB3Q12766 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
HMGXB3Q12766 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC34.82■■■■□ 3.16
HMGXB3Q12766 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC34.82■■■■□ 3.16
HMGXB3Q12766 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC34.82■■■■□ 3.16
HMGXB3Q12766 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
HMGXB3Q12766 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC34.82■■■■□ 3.16
HMGXB3Q12766 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
HMGXB3Q12766 C9orf163-202ENST00000624034 2573 ntBASIC34.82■■■■□ 3.16
HMGXB3Q12766 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC34.81■■■■□ 3.16
HMGXB3Q12766 PRELID1P1-202ENST00000567272 903 ntBASIC34.81■■■■□ 3.16
HMGXB3Q12766 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC34.81■■■■□ 3.16
HMGXB3Q12766 TMEM179-206ENST00000616017 1645 ntBASIC34.81■■■■□ 3.16
HMGXB3Q12766 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
HMGXB3Q12766 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC34.81■■■■□ 3.16
HMGXB3Q12766 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
HMGXB3Q12766 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
HMGXB3Q12766 KRT16P6-202ENST00000425692 1426 ntBASIC34.8■■■■□ 3.16
HMGXB3Q12766 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
HMGXB3Q12766 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC34.8■■■■□ 3.16
HMGXB3Q12766 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC34.8■■■■□ 3.16
HMGXB3Q12766 Telomerase-vert.1-201ENST00000363312 438 ntBASIC34.8■■■■□ 3.16
HMGXB3Q12766 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC34.8■■■■□ 3.16
HMGXB3Q12766 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC34.8■■■■□ 3.16
HMGXB3Q12766 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC34.8■■■■□ 3.16
HMGXB3Q12766 PHB2-202ENST00000440277 996 ntTSL 5 BASIC34.8■■■■□ 3.16
HMGXB3Q12766 FAAHP1-202ENST00000446499 1238 ntBASIC34.8■■■■□ 3.16
HMGXB3Q12766 AC092119.3-201ENST00000612618 583 ntBASIC34.8■■■■□ 3.16
HMGXB3Q12766 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
HMGXB3Q12766 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
HMGXB3Q12766 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
HMGXB3Q12766 AL049796.1-201ENST00000565336 1766 ntBASIC34.79■■■■□ 3.16
HMGXB3Q12766 HBZP1-201ENST00000354915 429 ntBASIC34.79■■■■□ 3.16
HMGXB3Q12766 AL645929.1-201ENST00000420084 975 ntBASIC34.79■■■■□ 3.16
HMGXB3Q12766 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC34.79■■■■□ 3.16
HMGXB3Q12766 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC34.79■■■■□ 3.16
HMGXB3Q12766 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC34.79■■■■□ 3.16
HMGXB3Q12766 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
HMGXB3Q12766 GUSBP5-202ENST00000510805 1989 ntBASIC34.79■■■■□ 3.16
HMGXB3Q12766 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC34.78■■■■□ 3.16
HMGXB3Q12766 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
HMGXB3Q12766 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC34.78■■■■□ 3.16
HMGXB3Q12766 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
HMGXB3Q12766 AC004870.1-201ENST00000315132 882 ntBASIC34.78■■■■□ 3.16
HMGXB3Q12766 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC34.78■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms