Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKDCP78527 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKDCP78527 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKDCP78527 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PRKDCP78527 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKDCP78527 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKDCP78527 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKDCP78527 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKDCP78527 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKDCP78527 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKDCP78527 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
PRKDCP78527 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PRKDCP78527 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC14.31□□□□□ -0.12
PRKDCP78527 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKDCP78527 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKDCP78527 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PRKDCP78527 HLA-A-209ENST00000638375 975 ntBASIC14.31□□□□□ -0.12
PRKDCP78527 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.31□□□□□ -0.12
PRKDCP78527 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.31□□□□□ -0.12
PRKDCP78527 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKDCP78527 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKDCP78527 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.31□□□□□ -0.12
PRKDCP78527 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRKDCP78527 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRKDCP78527 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRKDCP78527 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.31□□□□□ -0.12
PRKDCP78527 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.31□□□□□ -0.12
PRKDCP78527 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKDCP78527 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
PRKDCP78527 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PRKDCP78527 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.31□□□□□ -0.12
PRKDCP78527 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.31□□□□□ -0.12
PRKDCP78527 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.31□□□□□ -0.12
PRKDCP78527 AC243591.1-201ENST00000452967 1364 ntBASIC14.3□□□□□ -0.12
PRKDCP78527 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.3□□□□□ -0.12
PRKDCP78527 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.3□□□□□ -0.12
PRKDCP78527 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PRKDCP78527 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PRKDCP78527 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.3□□□□□ -0.12
PRKDCP78527 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 HBZP1-201ENST00000354915 429 ntBASIC14.3□□□□□ -0.12
PRKDCP78527 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.3□□□□□ -0.12
PRKDCP78527 AC011498.5-201ENST00000592027 486 ntBASIC14.3□□□□□ -0.12
PRKDCP78527 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
PRKDCP78527 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.3□□□□□ -0.12
PRKDCP78527 NUS1P1-201ENST00000446295 882 ntBASIC14.3□□□□□ -0.12
PRKDCP78527 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
PRKDCP78527 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.3□□□□□ -0.12
PRKDCP78527 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PRKDCP78527 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.3□□□□□ -0.12
PRKDCP78527 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.3□□□□□ -0.12
PRKDCP78527 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.3□□□□□ -0.12
PRKDCP78527 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PRKDCP78527 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PRKDCP78527 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRKDCP78527 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.29□□□□□ -0.12
PRKDCP78527 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.29□□□□□ -0.12
PRKDCP78527 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PRKDCP78527 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.29□□□□□ -0.12
PRKDCP78527 AC055717.3-201ENST00000622967 595 ntBASIC14.29□□□□□ -0.12
PRKDCP78527 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.29□□□□□ -0.12
PRKDCP78527 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PRKDCP78527 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC14.29□□□□□ -0.12
PRKDCP78527 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRKDCP78527 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRKDCP78527 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRKDCP78527 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PRKDCP78527 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.29□□□□□ -0.12
PRKDCP78527 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.29□□□□□ -0.12
PRKDCP78527 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PRKDCP78527 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.29□□□□□ -0.12
PRKDCP78527 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRKDCP78527 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.29□□□□□ -0.12
PRKDCP78527 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRKDCP78527 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRKDCP78527 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PRKDCP78527 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PRKDCP78527 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.29□□□□□ -0.12
PRKDCP78527 AP003041.3-201ENST00000527151 707 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms