Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NKX6-1P78426 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
NKX6-1P78426 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX6-1P78426 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX6-1P78426 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NKX6-1P78426 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.3■□□□□ 0.36
NKX6-1P78426 RCN1P1-201ENST00000400413 996 ntBASIC17.3■□□□□ 0.36
NKX6-1P78426 AL390719.1-204ENST00000412397 1219 ntBASIC17.3■□□□□ 0.36
NKX6-1P78426 TSPY15P-201ENST00000457163 923 ntBASIC17.3■□□□□ 0.36
NKX6-1P78426 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.3■□□□□ 0.36
NKX6-1P78426 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX6-1P78426 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX6-1P78426 PRKY-204ENST00000533551 1019 ntBASIC17.3■□□□□ 0.36
NKX6-1P78426 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.3■□□□□ 0.36
NKX6-1P78426 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX6-1P78426 AC113410.3-201ENST00000623366 203 ntBASIC17.3■□□□□ 0.36
NKX6-1P78426 AC097493.4-201ENST00000641197 219 ntBASIC17.3■□□□□ 0.36
NKX6-1P78426 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.3■□□□□ 0.36
NKX6-1P78426 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX6-1P78426 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
NKX6-1P78426 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.29■□□□□ 0.36
NKX6-1P78426 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NKX6-1P78426 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX6-1P78426 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX6-1P78426 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX6-1P78426 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.29■□□□□ 0.36
NKX6-1P78426 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX6-1P78426 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.29■□□□□ 0.36
NKX6-1P78426 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX6-1P78426 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NKX6-1P78426 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.29■□□□□ 0.36
NKX6-1P78426 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NKX6-1P78426 AC006557.6-201ENST00000623071 864 ntBASIC17.29■□□□□ 0.36
NKX6-1P78426 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.29■□□□□ 0.36
NKX6-1P78426 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.29■□□□□ 0.36
NKX6-1P78426 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX6-1P78426 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.29■□□□□ 0.36
NKX6-1P78426 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 AC092720.2-201ENST00000602388 1665 ntBASIC17.29■□□□□ 0.36
NKX6-1P78426 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX6-1P78426 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NKX6-1P78426 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.28■□□□□ 0.36
NKX6-1P78426 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NKX6-1P78426 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX6-1P78426 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 AL355075.4-201ENST00000554988 638 ntBASIC17.28■□□□□ 0.36
NKX6-1P78426 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.28■□□□□ 0.36
NKX6-1P78426 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX6-1P78426 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.28■□□□□ 0.36
NKX6-1P78426 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.28■□□□□ 0.36
NKX6-1P78426 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.28■□□□□ 0.36
NKX6-1P78426 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NKX6-1P78426 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NKX6-1P78426 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
NKX6-1P78426 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NKX6-1P78426 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.28■□□□□ 0.36
NKX6-1P78426 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX6-1P78426 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-1P78426 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX6-1P78426 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NKX6-1P78426 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.27■□□□□ 0.36
NKX6-1P78426 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms