Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPS3AP61247 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS3AP61247 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RPS3AP61247 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.37■□□□□ 0.53
RPS3AP61247 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS3AP61247 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.37■□□□□ 0.53
RPS3AP61247 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS3AP61247 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.37■□□□□ 0.53
RPS3AP61247 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RPS3AP61247 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RPS3AP61247 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS3AP61247 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS3AP61247 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.37■□□□□ 0.53
RPS3AP61247 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.37■□□□□ 0.53
RPS3AP61247 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.37■□□□□ 0.53
RPS3AP61247 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.37■□□□□ 0.53
RPS3AP61247 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RPS3AP61247 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS3AP61247 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPS3AP61247 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPS3AP61247 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPS3AP61247 TCF3P1-201ENST00000423021 1937 ntBASIC18.37■□□□□ 0.53
RPS3AP61247 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.37■□□□□ 0.53
RPS3AP61247 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.36■□□□□ 0.53
RPS3AP61247 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.36■□□□□ 0.53
RPS3AP61247 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.36■□□□□ 0.53
RPS3AP61247 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RPS3AP61247 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
RPS3AP61247 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RPS3AP61247 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.36■□□□□ 0.53
RPS3AP61247 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.36■□□□□ 0.53
RPS3AP61247 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.36■□□□□ 0.53
RPS3AP61247 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.36■□□□□ 0.53
RPS3AP61247 AC087633.2-202ENST00000565166 1439 ntBASIC18.36■□□□□ 0.53
RPS3AP61247 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.36■□□□□ 0.53
RPS3AP61247 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPS3AP61247 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
RPS3AP61247 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RPS3AP61247 NOC2LP1-202ENST00000452600 2235 ntBASIC18.35■□□□□ 0.53
RPS3AP61247 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RPS3AP61247 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.35■□□□□ 0.53
RPS3AP61247 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 KRT17P1-201ENST00000399211 1546 ntBASIC18.35■□□□□ 0.53
RPS3AP61247 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS3AP61247 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RPS3AP61247 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RPS3AP61247 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.35■□□□□ 0.53
RPS3AP61247 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.35■□□□□ 0.53
RPS3AP61247 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 DUSP5P2-201ENST00000426873 1033 ntBASIC18.35■□□□□ 0.53
RPS3AP61247 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.35■□□□□ 0.53
RPS3AP61247 AC091874.3-201ENST00000512672 1195 ntBASIC18.35■□□□□ 0.53
RPS3AP61247 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS3AP61247 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS3AP61247 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RPS3AP61247 AC105020.6-201ENST00000621523 1217 ntBASIC18.35■□□□□ 0.53
RPS3AP61247 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RPS3AP61247 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS3AP61247 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RPS3AP61247 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RPS3AP61247 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.35■□□□□ 0.53
RPS3AP61247 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPS3AP61247 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RPS3AP61247 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RPS3AP61247 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RPS3AP61247 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.34■□□□□ 0.53
RPS3AP61247 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.34■□□□□ 0.53
RPS3AP61247 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RPS3AP61247 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPS3AP61247 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RPS3AP61247 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.34■□□□□ 0.53
RPS3AP61247 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPS3AP61247 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.34■□□□□ 0.53
RPS3AP61247 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms