Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 AC116562.2-201ENST00000507042 360 ntBASIC18.84■□□□□ 0.61
GFERP55789 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.84■□□□□ 0.61
GFERP55789 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.84■□□□□ 0.61
GFERP55789 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.84■□□□□ 0.61
GFERP55789 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFERP55789 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFERP55789 TMEM179-206ENST00000616017 1645 ntBASIC18.84■□□□□ 0.61
GFERP55789 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFERP55789 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFERP55789 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFERP55789 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFERP55789 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.83■□□□□ 0.61
GFERP55789 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GFERP55789 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFERP55789 MIR1238-201ENST00000408483 83 ntBASIC18.83■□□□□ 0.6
GFERP55789 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.83■□□□□ 0.6
GFERP55789 KRT18P21-201ENST00000515767 1272 ntBASIC18.83■□□□□ 0.6
GFERP55789 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFERP55789 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFERP55789 AC012306.2-201ENST00000609350 630 ntBASIC18.83■□□□□ 0.6
GFERP55789 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.83■□□□□ 0.6
GFERP55789 AC097493.4-201ENST00000641197 219 ntBASIC18.83■□□□□ 0.6
GFERP55789 AL031985.4-201ENST00000642138 673 ntBASIC18.83■□□□□ 0.6
GFERP55789 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFERP55789 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFERP55789 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFERP55789 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.83■□□□□ 0.6
GFERP55789 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GFERP55789 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFERP55789 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.82■□□□□ 0.6
GFERP55789 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFERP55789 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFERP55789 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFERP55789 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFERP55789 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.82■□□□□ 0.6
GFERP55789 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.82■□□□□ 0.6
GFERP55789 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.82■□□□□ 0.6
GFERP55789 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.82■□□□□ 0.6
GFERP55789 AL691432.2-201ENST00000607222 2038 ntBASIC18.82■□□□□ 0.6
GFERP55789 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFERP55789 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFERP55789 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFERP55789 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFERP55789 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFERP55789 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.82■□□□□ 0.6
GFERP55789 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFERP55789 GABARAPL3-202ENST00000624044 1851 ntBASIC18.82■□□□□ 0.6
GFERP55789 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.81■□□□□ 0.6
GFERP55789 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 AL162377.1-201ENST00000618844 1793 ntBASIC18.81■□□□□ 0.6
GFERP55789 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.81■□□□□ 0.6
GFERP55789 MESTP1-201ENST00000404287 994 ntBASIC18.81■□□□□ 0.6
GFERP55789 AC004980.1-204ENST00000429707 299 ntBASIC18.81■□□□□ 0.6
GFERP55789 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.81■□□□□ 0.6
GFERP55789 FAM210CP-201ENST00000445714 574 ntBASIC18.81■□□□□ 0.6
GFERP55789 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.81■□□□□ 0.6
GFERP55789 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.81■□□□□ 0.6
GFERP55789 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.81■□□□□ 0.6
GFERP55789 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.81■□□□□ 0.6
GFERP55789 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.81■□□□□ 0.6
GFERP55789 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.81■□□□□ 0.6
GFERP55789 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 AP001271.2-201ENST00000624018 1556 ntBASIC18.81■□□□□ 0.6
GFERP55789 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GFERP55789 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.8■□□□□ 0.6
GFERP55789 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.8■□□□□ 0.6
GFERP55789 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.8■□□□□ 0.6
GFERP55789 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.8■□□□□ 0.6
GFERP55789 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.8■□□□□ 0.6
GFERP55789 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.8■□□□□ 0.6
GFERP55789 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 MIR6786-201ENST00000616843 113 ntBASIC18.8■□□□□ 0.6
GFERP55789 HLA-A-209ENST00000638375 975 ntBASIC18.8■□□□□ 0.6
GFERP55789 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
GFERP55789 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GFERP55789 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFERP55789 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms