Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH4P55283 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH4P55283 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH4P55283 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH4P55283 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH4P55283 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH4P55283 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDH4P55283 TUBB8P6-201ENST00000436895 1288 ntBASIC20.16■□□□□ 0.82
CDH4P55283 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.16■□□□□ 0.82
CDH4P55283 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH4P55283 HTR7P1-201ENST00000538670 1336 ntBASIC20.16■□□□□ 0.82
CDH4P55283 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH4P55283 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDH4P55283 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH4P55283 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CDH4P55283 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDH4P55283 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDH4P55283 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CDH4P55283 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CDH4P55283 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH4P55283 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH4P55283 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDH4P55283 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH4P55283 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CDH4P55283 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH4P55283 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH4P55283 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH4P55283 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.15■□□□□ 0.82
CDH4P55283 AC012618.2-201ENST00000428058 849 ntBASIC20.15■□□□□ 0.82
CDH4P55283 RPS2P4-201ENST00000476944 856 ntBASIC20.15■□□□□ 0.82
CDH4P55283 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CDH4P55283 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH4P55283 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.15■□□□□ 0.82
CDH4P55283 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDH4P55283 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH4P55283 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH4P55283 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH4P55283 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDH4P55283 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH4P55283 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH4P55283 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CDH4P55283 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
CDH4P55283 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CDH4P55283 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH4P55283 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH4P55283 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH4P55283 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDH4P55283 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDH4P55283 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH4P55283 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH4P55283 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CDH4P55283 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH4P55283 RPS2P55-201ENST00000397318 883 ntBASIC20.14■□□□□ 0.81
CDH4P55283 AL353807.1-201ENST00000427475 662 ntBASIC20.14■□□□□ 0.81
CDH4P55283 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH4P55283 AC107956.1-201ENST00000494359 873 ntBASIC20.14■□□□□ 0.81
CDH4P55283 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH4P55283 Z99916.2-201ENST00000604037 246 ntBASIC20.14■□□□□ 0.81
CDH4P55283 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH4P55283 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH4P55283 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH4P55283 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH4P55283 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
CDH4P55283 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
CDH4P55283 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CDH4P55283 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH4P55283 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH4P55283 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH4P55283 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH4P55283 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH4P55283 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH4P55283 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH4P55283 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH4P55283 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.13■□□□□ 0.81
CDH4P55283 AC233702.5-201ENST00000584107 538 ntBASIC20.13■□□□□ 0.81
CDH4P55283 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH4P55283 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH4P55283 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH4P55283 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH4P55283 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH4P55283 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDH4P55283 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.12■□□□□ 0.81
CDH4P55283 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH4P55283 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH4P55283 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH4P55283 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH4P55283 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH4P55283 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.12■□□□□ 0.81
CDH4P55283 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH4P55283 C1QL1P1-201ENST00000568105 661 ntBASIC20.12■□□□□ 0.81
CDH4P55283 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH4P55283 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH4P55283 AP001412.1-201ENST00000608405 714 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms